Gene : Glyma.08G196800 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  1968
Name:  ? Glyma.08G196800 Secondary Identifier:  ? PAC:30538511
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G196800 0.5kb upstream 0.5kb upstream 5294 true Chr08: 15883299-15888592 Glycine max
Glyma.08G196800 0.5kb upstream 0.5kb upstream 500 false Chr08: 15883299-15883798 Glycine max
Glyma.08G196800 0.5kb downstream 0.5kb downstream 5294 true Chr08: 15883799-15889092 Glycine max
Glyma.08G196800 0.5kb downstream 0.5kb downstream 500 false Chr08: 15888593-15889092 Glycine max
Glyma.08G196800 1.0kb upstream 1.0kb upstream 5794 true Chr08: 15882799-15888592 Glycine max
Glyma.08G196800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15882799-15883798 Glycine max
Glyma.08G196800 1.0kb downstream 1.0kb downstream 5794 true Chr08: 15883799-15889592 Glycine max
Glyma.08G196800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15888593-15889592 Glycine max
Glyma.08G196800 2.0kb upstream 2.0kb upstream 6794 true Chr08: 15881799-15888592 Glycine max
Glyma.08G196800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15881799-15883798 Glycine max
Glyma.08G196800 2.0kb downstream 2.0kb downstream 6794 true Chr08: 15883799-15890592 Glycine max
Glyma.08G196800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15888593-15890592 Glycine max
Glyma.08G196800 5.0kb upstream 5.0kb upstream 9794 true Chr08: 15878799-15888592 Glycine max
Glyma.08G196800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15878799-15883798 Glycine max
Glyma.08G196800 5.0kb downstream 5.0kb downstream 9794 true Chr08: 15883799-15893592 Glycine max
Glyma.08G196800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15888593-15893592 Glycine max
Glyma.08G196800 10.0kb upstream 10.0kb upstream 14794 true Chr08: 15873799-15888592 Glycine max
Glyma.08G196800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15873799-15883798 Glycine max
Glyma.08G196800 10.0kb downstream 10.0kb downstream 14794 true Chr08: 15883799-15898592 Glycine max
Glyma.08G196800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15888593-15898592 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296998 5265 Fabidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9908 0.0 61.0626    
cufflinks 11.1668 0.0 39.4788    
cufflinks 22.9364 0.0 77.4256 High  
cufflinks 29.014 0.0 99.2629 High High
cufflinks 11.6653 0.0 41.037    
cufflinks 8.50328 0.0 32.0225   Low
cufflinks 19.1803 0.0 66.2879    
cufflinks 16.3844 0.0 55.6151    
cufflinks 20.8149 0.0 61.761 High  
cufflinks 1.226        
cufflinks 1.152        
cufflinks 3.753       High
cufflinks 1.842        
cufflinks 1.532        
cufflinks 1.953        
cufflinks 1.273        
cufflinks 1.361        
cufflinks 4.152       High
cufflinks 1.86        
cufflinks 3.51       High
cufflinks 1.127        
cufflinks 3.294       High
cufflinks 0.996       Low
cufflinks 1.401        
cufflinks 2.285        
cufflinks 1.14        

0 Strain