Gene : Glyma.08G197500 G. max Wm82.a2.v1
Defline:  (1 of 4) K12125 - protein EARLY FLOWERING 3 (ELF3) Genomic Order:  1975
Name:  ? Glyma.08G197500 Secondary Identifier:  ? PAC:30539703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G197500 0.5kb upstream 0.5kb upstream 5569 true Chr08: 15926100-15931668 Glycine max
Glyma.08G197500 0.5kb upstream 0.5kb upstream 500 false Chr08: 15931169-15931668 Glycine max
Glyma.08G197500 0.5kb downstream 0.5kb downstream 5569 true Chr08: 15925600-15931168 Glycine max
Glyma.08G197500 0.5kb downstream 0.5kb downstream 500 false Chr08: 15925600-15926099 Glycine max
Glyma.08G197500 1.0kb upstream 1.0kb upstream 6069 true Chr08: 15926100-15932168 Glycine max
Glyma.08G197500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15931169-15932168 Glycine max
Glyma.08G197500 1.0kb downstream 1.0kb downstream 6069 true Chr08: 15925100-15931168 Glycine max
Glyma.08G197500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15925100-15926099 Glycine max
Glyma.08G197500 2.0kb upstream 2.0kb upstream 7069 true Chr08: 15926100-15933168 Glycine max
Glyma.08G197500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15931169-15933168 Glycine max
Glyma.08G197500 2.0kb downstream 2.0kb downstream 7069 true Chr08: 15924100-15931168 Glycine max
Glyma.08G197500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15924100-15926099 Glycine max
Glyma.08G197500 5.0kb upstream 5.0kb upstream 10069 true Chr08: 15926100-15936168 Glycine max
Glyma.08G197500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15931169-15936168 Glycine max
Glyma.08G197500 5.0kb downstream 5.0kb downstream 10069 true Chr08: 15921100-15931168 Glycine max
Glyma.08G197500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15921100-15926099 Glycine max
Glyma.08G197500 10.0kb upstream 10.0kb upstream 15069 true Chr08: 15926100-15941168 Glycine max
Glyma.08G197500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15931169-15941168 Glycine max
Glyma.08G197500 10.0kb downstream 10.0kb downstream 15069 true Chr08: 15916100-15931168 Glycine max
Glyma.08G197500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15916100-15926099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300751 5265 Fabidae View MSA
124071157 5270 Rosid View MSA
123751825 5271 Pentapetalae View MSA
122796680 5272 Eudicot View MSA
122044272 5273 Angiosperm View MSA
121350755 5274 Embryophyte View MSA
123381878 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.5033 0.0 16.3293   High
cufflinks 2.47346 0.0 13.9418   High
cufflinks 0.147077 0.0 0.973015 Low  
cufflinks 0.479948 0.0 6.70022    
cufflinks 0.0474602 0.0 0.604671 Low Low
cufflinks 0.291958 0.0 1.77781    
cufflinks 0.670432 0.0 7.68863    
cufflinks 0.337711 0.0 2.20453    
cufflinks 0.0779995 0.0 0.822544 Low Low
cufflinks 2.417       High
cufflinks 0.027     Low Low
cufflinks 0.326        
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.105        
cufflinks 1.136        
cufflinks 0.734        
cufflinks 0.632        
cufflinks 1.177        
cufflinks 1.305        
cufflinks 0.016     Low Low
cufflinks 1.514        
cufflinks 3.071       High
cufflinks 0.022     Low Low
cufflinks 1.431        
cufflinks 0.125        

0 Strain