Gene : Glyma.08G183900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13339 - COP9 SIGNALOSOME COMPLEX SUBUNIT 8 Genomic Order:  1839
Name:  ? Glyma.08G183900 Secondary Identifier:  ? PAC:30538156
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G183900 0.5kb upstream 0.5kb upstream 2814 true Chr08: 14745705-14748518 Glycine max
Glyma.08G183900 0.5kb upstream 0.5kb upstream 500 false Chr08: 14748019-14748518 Glycine max
Glyma.08G183900 0.5kb downstream 0.5kb downstream 2814 true Chr08: 14745205-14748018 Glycine max
Glyma.08G183900 0.5kb downstream 0.5kb downstream 500 false Chr08: 14745205-14745704 Glycine max
Glyma.08G183900 1.0kb upstream 1.0kb upstream 3314 true Chr08: 14745705-14749018 Glycine max
Glyma.08G183900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14748019-14749018 Glycine max
Glyma.08G183900 1.0kb downstream 1.0kb downstream 3314 true Chr08: 14744705-14748018 Glycine max
Glyma.08G183900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14744705-14745704 Glycine max
Glyma.08G183900 2.0kb upstream 2.0kb upstream 4314 true Chr08: 14745705-14750018 Glycine max
Glyma.08G183900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14748019-14750018 Glycine max
Glyma.08G183900 2.0kb downstream 2.0kb downstream 4314 true Chr08: 14743705-14748018 Glycine max
Glyma.08G183900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14743705-14745704 Glycine max
Glyma.08G183900 5.0kb upstream 5.0kb upstream 7314 true Chr08: 14745705-14753018 Glycine max
Glyma.08G183900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14748019-14753018 Glycine max
Glyma.08G183900 5.0kb downstream 5.0kb downstream 7314 true Chr08: 14740705-14748018 Glycine max
Glyma.08G183900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14740705-14745704 Glycine max
Glyma.08G183900 10.0kb upstream 10.0kb upstream 12314 true Chr08: 14745705-14758018 Glycine max
Glyma.08G183900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14748019-14758018 Glycine max
Glyma.08G183900 10.0kb downstream 10.0kb downstream 12314 true Chr08: 14735705-14748018 Glycine max
Glyma.08G183900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14735705-14745704 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304415 5265 Fabidae View MSA
124066881 5270 Rosid View MSA
123740395 5271 Pentapetalae View MSA
122795541 5272 Eudicot View MSA
122042983 5273 Angiosperm View MSA
121348837 5274 Embryophyte View MSA
123425224 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.8408 0.0 92.2495 High  
cufflinks 24.5294 0.0 93.1931 High  
cufflinks 43.0187 0.0 161.043 High High
cufflinks 19.3707 0.0 67.8381   Low
cufflinks 21.8034 0.0 86.5083 High  
cufflinks 34.1311 0.0 117.297 High High
cufflinks 25.8456 0.0 99.6055 High  
cufflinks 23.4175 0.0 89.1602 High  
cufflinks 28.7747 0.0 110.947 High  
cufflinks 1.978       Low
cufflinks 2.16        
cufflinks 2.614        
cufflinks 2.779       High
cufflinks 3.017       High
cufflinks 2.131        
cufflinks 2.248        
cufflinks 1.847       Low
cufflinks 2.19        
cufflinks 2.807       High
cufflinks 2.213        
cufflinks 2.064        
cufflinks 2.314        
cufflinks 2.583        
cufflinks 2.492        
cufflinks 2.194        
cufflinks 1.789       Low

0 Strain