Gene : Glyma.08G184300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21141:SF37 - MRNA TURNOVER PROTEIN 4 HOMOLOG Genomic Order:  1843
Name:  ? Glyma.08G184300 Secondary Identifier:  ? PAC:30536320
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G184300 0.5kb upstream 0.5kb upstream 3109 true Chr08: 14783845-14786953 Glycine max
Glyma.08G184300 0.5kb upstream 0.5kb upstream 500 false Chr08: 14783845-14784344 Glycine max
Glyma.08G184300 0.5kb downstream 0.5kb downstream 3109 true Chr08: 14784345-14787453 Glycine max
Glyma.08G184300 0.5kb downstream 0.5kb downstream 500 false Chr08: 14786954-14787453 Glycine max
Glyma.08G184300 1.0kb upstream 1.0kb upstream 3609 true Chr08: 14783345-14786953 Glycine max
Glyma.08G184300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14783345-14784344 Glycine max
Glyma.08G184300 1.0kb downstream 1.0kb downstream 3609 true Chr08: 14784345-14787953 Glycine max
Glyma.08G184300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14786954-14787953 Glycine max
Glyma.08G184300 2.0kb upstream 2.0kb upstream 4609 true Chr08: 14782345-14786953 Glycine max
Glyma.08G184300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14782345-14784344 Glycine max
Glyma.08G184300 2.0kb downstream 2.0kb downstream 4609 true Chr08: 14784345-14788953 Glycine max
Glyma.08G184300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14786954-14788953 Glycine max
Glyma.08G184300 5.0kb upstream 5.0kb upstream 7609 true Chr08: 14779345-14786953 Glycine max
Glyma.08G184300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14779345-14784344 Glycine max
Glyma.08G184300 5.0kb downstream 5.0kb downstream 7609 true Chr08: 14784345-14791953 Glycine max
Glyma.08G184300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14786954-14791953 Glycine max
Glyma.08G184300 10.0kb upstream 10.0kb upstream 12609 true Chr08: 14774345-14786953 Glycine max
Glyma.08G184300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14774345-14784344 Glycine max
Glyma.08G184300 10.0kb downstream 10.0kb downstream 12609 true Chr08: 14784345-14796953 Glycine max
Glyma.08G184300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14786954-14796953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302322 5265 Fabidae View MSA
124062070 5270 Rosid View MSA
123743293 5271 Pentapetalae View MSA
122790170 5272 Eudicot View MSA
122047939 5273 Angiosperm View MSA
121346262 5274 Embryophyte View MSA
123423929 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.3441 0.0 59.7592 High  
cufflinks 18.7819 0.0 50.5054    
cufflinks 7.01805 0.0 20.513   Low
cufflinks 14.6347 0.0 39.8512    
cufflinks 28.1924 0.0 75.2138 High High
cufflinks 20.3402 0.0 54.5315    
cufflinks 19.0659 0.0 51.2642    
cufflinks 17.4678 0.0 47.0982    
cufflinks 19.4529 0.0 52.2324    
cufflinks 5.609        
cufflinks 1.815       Low
cufflinks 7.292     High  
cufflinks 17.298     High High
cufflinks 24.053     High High
cufflinks 1.967       Low
cufflinks 4.923        
cufflinks 5.714        
cufflinks 6.858        
cufflinks 9.291     High  
cufflinks 2.823        
cufflinks 3.215        
cufflinks 3.492        
cufflinks 9.117     High  
cufflinks 2.404       Low
cufflinks 4.164        
cufflinks 4.699        

0 Strain