Gene : Glyma.08G175500 G. max Wm82.a2.v1
Defline:  (1 of 16) KOG1865 - Ubiquitin carboxyl-terminal hydrolase Genomic Order:  1755
Name:  ? Glyma.08G175500 Secondary Identifier:  ? PAC:30538442
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G175500 0.5kb upstream 0.5kb upstream 13446 true Chr08: 14003572-14017017 Glycine max
Glyma.08G175500 0.5kb upstream 0.5kb upstream 500 false Chr08: 14016518-14017017 Glycine max
Glyma.08G175500 0.5kb downstream 0.5kb downstream 13446 true Chr08: 14003072-14016517 Glycine max
Glyma.08G175500 0.5kb downstream 0.5kb downstream 500 false Chr08: 14003072-14003571 Glycine max
Glyma.08G175500 1.0kb upstream 1.0kb upstream 13946 true Chr08: 14003572-14017517 Glycine max
Glyma.08G175500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14016518-14017517 Glycine max
Glyma.08G175500 1.0kb downstream 1.0kb downstream 13946 true Chr08: 14002572-14016517 Glycine max
Glyma.08G175500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14002572-14003571 Glycine max
Glyma.08G175500 2.0kb upstream 2.0kb upstream 14946 true Chr08: 14003572-14018517 Glycine max
Glyma.08G175500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14016518-14018517 Glycine max
Glyma.08G175500 2.0kb downstream 2.0kb downstream 14946 true Chr08: 14001572-14016517 Glycine max
Glyma.08G175500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14001572-14003571 Glycine max
Glyma.08G175500 5.0kb upstream 5.0kb upstream 17946 true Chr08: 14003572-14021517 Glycine max
Glyma.08G175500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14016518-14021517 Glycine max
Glyma.08G175500 5.0kb downstream 5.0kb downstream 17946 true Chr08: 13998572-14016517 Glycine max
Glyma.08G175500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13998572-14003571 Glycine max
Glyma.08G175500 10.0kb upstream 10.0kb upstream 22946 true Chr08: 14003572-14026517 Glycine max
Glyma.08G175500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14016518-14026517 Glycine max
Glyma.08G175500 10.0kb downstream 10.0kb downstream 22946 true Chr08: 13993572-14016517 Glycine max
Glyma.08G175500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13993572-14003571 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309688 5265 Fabidae View MSA
124067125 5270 Rosid View MSA
123746951 5271 Pentapetalae View MSA
122790465 5272 Eudicot View MSA
122045970 5273 Angiosperm View MSA
121346163 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.70485 0.0 29.8348   High
cufflinks 5.93405 0.0 21.1211    
cufflinks 5.32753 0.0 19.2077   Low
cufflinks 8.19415 0.0 28.1658    
cufflinks 8.48588 0.0 29.0966    
cufflinks 6.76698 0.0 23.6214    
cufflinks 4.50226 0.0 16.8154   Low
cufflinks 7.39421 0.0 25.6187    
cufflinks 7.2383 0.0 25.1142    
cufflinks 0.716        
cufflinks 0.673        
cufflinks 0.681        
cufflinks 1.022       High
cufflinks 1.194       High
cufflinks 0.812        
cufflinks 0.827        
cufflinks 0.517       Low
cufflinks 0.833        
cufflinks 0.873        
cufflinks 0.794        
cufflinks 0.85        
cufflinks 0.84        
cufflinks 0.966       High
cufflinks 0.686        
cufflinks 0.769        
cufflinks 0.705        

0 Strain