Gene : Glyma.08G175700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10509:SF27 - PROTEIN COMT-1 Genomic Order:  1757
Name:  ? Glyma.08G175700 Secondary Identifier:  ? PAC:30540674
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY-361 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G175700 0.5kb upstream 0.5kb upstream 3760 true Chr08: 14032115-14035874 Glycine max
Glyma.08G175700 0.5kb upstream 0.5kb upstream 500 false Chr08: 14035375-14035874 Glycine max
Glyma.08G175700 0.5kb downstream 0.5kb downstream 3760 true Chr08: 14031615-14035374 Glycine max
Glyma.08G175700 0.5kb downstream 0.5kb downstream 500 false Chr08: 14031615-14032114 Glycine max
Glyma.08G175700 1.0kb upstream 1.0kb upstream 4260 true Chr08: 14032115-14036374 Glycine max
Glyma.08G175700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14035375-14036374 Glycine max
Glyma.08G175700 1.0kb downstream 1.0kb downstream 4260 true Chr08: 14031115-14035374 Glycine max
Glyma.08G175700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14031115-14032114 Glycine max
Glyma.08G175700 2.0kb upstream 2.0kb upstream 5260 true Chr08: 14032115-14037374 Glycine max
Glyma.08G175700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14035375-14037374 Glycine max
Glyma.08G175700 2.0kb downstream 2.0kb downstream 5260 true Chr08: 14030115-14035374 Glycine max
Glyma.08G175700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14030115-14032114 Glycine max
Glyma.08G175700 5.0kb upstream 5.0kb upstream 8260 true Chr08: 14032115-14040374 Glycine max
Glyma.08G175700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14035375-14040374 Glycine max
Glyma.08G175700 5.0kb downstream 5.0kb downstream 8260 true Chr08: 14027115-14035374 Glycine max
Glyma.08G175700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14027115-14032114 Glycine max
Glyma.08G175700 10.0kb upstream 10.0kb upstream 13260 true Chr08: 14032115-14045374 Glycine max
Glyma.08G175700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14035375-14045374 Glycine max
Glyma.08G175700 10.0kb downstream 10.0kb downstream 13260 true Chr08: 14022115-14035374 Glycine max
Glyma.08G175700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14022115-14032114 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303007 5265 Fabidae View MSA
124062040 5270 Rosid View MSA
123738490 5271 Pentapetalae View MSA
122794453 5272 Eudicot View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.86181 0.0 9.83739   High
cufflinks 3.39707 0.0 10.9913   High
cufflinks 1.71645 0.0 12.6641    
cufflinks 1.71432 0.0 6.76061    
cufflinks 1.71512 0.0 6.79049    
cufflinks 0.823394 0.0 3.67358   Low
cufflinks 1.6074 0.0 6.51008    
cufflinks 1.8034 0.0 12.5944    
cufflinks 2.0732 0.0 7.62679    
cufflinks 0.804        
cufflinks 0.119       Low
cufflinks 1.005        
cufflinks 0.614        
cufflinks 0.733        
cufflinks 0.207       Low
cufflinks 1.224        
cufflinks 0.266        
cufflinks 0.931        
cufflinks 1.253        
cufflinks 1.046        
cufflinks 0.17       Low
cufflinks 1.051        
cufflinks 1.457       High
cufflinks 0.191       Low
cufflinks 1.252        
cufflinks 0.222       Low

0 Strain