Gene : Glyma.08G214600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Genomic Order:  2146
Name:  ? Glyma.08G214600 Secondary Identifier:  ? PAC:30538896
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G214600 0.5kb upstream 0.5kb upstream 8784 true Chr08: 17343819-17352602 Glycine max
Glyma.08G214600 0.5kb upstream 0.5kb upstream 500 false Chr08: 17352103-17352602 Glycine max
Glyma.08G214600 0.5kb downstream 0.5kb downstream 8784 true Chr08: 17343319-17352102 Glycine max
Glyma.08G214600 0.5kb downstream 0.5kb downstream 500 false Chr08: 17343319-17343818 Glycine max
Glyma.08G214600 1.0kb upstream 1.0kb upstream 9284 true Chr08: 17343819-17353102 Glycine max
Glyma.08G214600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17352103-17353102 Glycine max
Glyma.08G214600 1.0kb downstream 1.0kb downstream 9284 true Chr08: 17342819-17352102 Glycine max
Glyma.08G214600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17342819-17343818 Glycine max
Glyma.08G214600 2.0kb upstream 2.0kb upstream 10284 true Chr08: 17343819-17354102 Glycine max
Glyma.08G214600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17352103-17354102 Glycine max
Glyma.08G214600 2.0kb downstream 2.0kb downstream 10284 true Chr08: 17341819-17352102 Glycine max
Glyma.08G214600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17341819-17343818 Glycine max
Glyma.08G214600 5.0kb upstream 5.0kb upstream 13284 true Chr08: 17343819-17357102 Glycine max
Glyma.08G214600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17352103-17357102 Glycine max
Glyma.08G214600 5.0kb downstream 5.0kb downstream 13284 true Chr08: 17338819-17352102 Glycine max
Glyma.08G214600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17338819-17343818 Glycine max
Glyma.08G214600 10.0kb upstream 10.0kb upstream 18284 true Chr08: 17343819-17362102 Glycine max
Glyma.08G214600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17352103-17362102 Glycine max
Glyma.08G214600 10.0kb downstream 10.0kb downstream 18284 true Chr08: 17333819-17352102 Glycine max
Glyma.08G214600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17333819-17343818 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309385 5265 Fabidae View MSA
124063339 5270 Rosid View MSA
123747741 5271 Pentapetalae View MSA
122790823 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.6153 0.0 320.856 High  
cufflinks 26.7542 0.0 136.515 High Low
cufflinks 30.7917 0.0 187.058 High  
cufflinks 40.6473 0.0 266.174 High  
cufflinks 40.8247 0.0 284.952 High  
cufflinks 32.3572 0.0 189.1 High  
cufflinks 34.4874 0.0 173.552 High  
cufflinks 58.3035 0.0 446.888 High High
cufflinks 36.8127 0.0 227.45 High  
cufflinks 2.732        
cufflinks 1.365       Low
cufflinks 2.885       High
cufflinks 3.38       High
cufflinks 2.739        
cufflinks 2.062        
cufflinks 1.571        
cufflinks 2.414        
cufflinks 2.844       High
cufflinks 2.929       High
cufflinks 1.1       Low
cufflinks 1.954        
cufflinks 1.286       Low
cufflinks 1.313       Low
cufflinks 1.835        
cufflinks 1.29       Low
cufflinks 2.104        

0 Strain