Gene : Glyma.08G217200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21094:SF1 - GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-1 Genomic Order:  2172
Name:  ? Glyma.08G217200 Secondary Identifier:  ? PAC:30540588
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G217200 0.5kb upstream 0.5kb upstream 5045 true Chr08: 17629465-17634509 Glycine max
Glyma.08G217200 0.5kb upstream 0.5kb upstream 500 false Chr08: 17634010-17634509 Glycine max
Glyma.08G217200 0.5kb downstream 0.5kb downstream 5045 true Chr08: 17628965-17634009 Glycine max
Glyma.08G217200 0.5kb downstream 0.5kb downstream 500 false Chr08: 17628965-17629464 Glycine max
Glyma.08G217200 1.0kb upstream 1.0kb upstream 5545 true Chr08: 17629465-17635009 Glycine max
Glyma.08G217200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17634010-17635009 Glycine max
Glyma.08G217200 1.0kb downstream 1.0kb downstream 5545 true Chr08: 17628465-17634009 Glycine max
Glyma.08G217200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17628465-17629464 Glycine max
Glyma.08G217200 2.0kb upstream 2.0kb upstream 6545 true Chr08: 17629465-17636009 Glycine max
Glyma.08G217200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17634010-17636009 Glycine max
Glyma.08G217200 2.0kb downstream 2.0kb downstream 6545 true Chr08: 17627465-17634009 Glycine max
Glyma.08G217200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17627465-17629464 Glycine max
Glyma.08G217200 5.0kb upstream 5.0kb upstream 9545 true Chr08: 17629465-17639009 Glycine max
Glyma.08G217200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17634010-17639009 Glycine max
Glyma.08G217200 5.0kb downstream 5.0kb downstream 9545 true Chr08: 17624465-17634009 Glycine max
Glyma.08G217200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17624465-17629464 Glycine max
Glyma.08G217200 10.0kb upstream 10.0kb upstream 14545 true Chr08: 17629465-17644009 Glycine max
Glyma.08G217200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17634010-17644009 Glycine max
Glyma.08G217200 10.0kb downstream 10.0kb downstream 14545 true Chr08: 17619465-17634009 Glycine max
Glyma.08G217200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17619465-17629464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310974 5265 Fabidae View MSA
124071161 5270 Rosid View MSA
123751408 5271 Pentapetalae View MSA
122787730 5272 Eudicot View MSA
122044900 5273 Angiosperm View MSA
121348787 5274 Embryophyte View MSA
123427960 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.9017 0.0 146.216 High High
cufflinks 27.3936 0.0 81.1437 High  
cufflinks 57.986 0.0 182.053 High High
cufflinks 36.0657 0.0 107.885 High  
cufflinks 25.7279 0.0 77.0034 High Low
cufflinks 39.6975 0.0 119.15 High  
cufflinks 27.7148 0.0 82.8286 High  
cufflinks 39.5341 0.0 118.522 High  
cufflinks 27.5383 0.0 82.1481 High  
cufflinks 9.675     High  
cufflinks 12.489     High High
cufflinks 7.694     High  
cufflinks 6.826       Low
cufflinks 6.09       Low
cufflinks 8.009     High  
cufflinks 9.88     High  
cufflinks 6.422     High Low
cufflinks 9.599     High  
cufflinks 7.464     High  
cufflinks 11.147     High  
cufflinks 12.345     High High
cufflinks 11.121     High  
cufflinks 7.781     High  
cufflinks 13.955     High High
cufflinks 10.22     High  
cufflinks 10.544     High  

0 Strain