Gene : Glyma.08G218100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF404 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  2181
Name:  ? Glyma.08G218100 Secondary Identifier:  ? PAC:30539432
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-361 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G218100 0.5kb upstream 0.5kb upstream 3886 true Chr08: 17722577-17726462 Glycine max
Glyma.08G218100 0.5kb upstream 0.5kb upstream 500 false Chr08: 17722577-17723076 Glycine max
Glyma.08G218100 0.5kb downstream 0.5kb downstream 3886 true Chr08: 17723077-17726962 Glycine max
Glyma.08G218100 0.5kb downstream 0.5kb downstream 500 false Chr08: 17726463-17726962 Glycine max
Glyma.08G218100 1.0kb upstream 1.0kb upstream 4386 true Chr08: 17722077-17726462 Glycine max
Glyma.08G218100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17722077-17723076 Glycine max
Glyma.08G218100 1.0kb downstream 1.0kb downstream 4386 true Chr08: 17723077-17727462 Glycine max
Glyma.08G218100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17726463-17727462 Glycine max
Glyma.08G218100 2.0kb upstream 2.0kb upstream 5386 true Chr08: 17721077-17726462 Glycine max
Glyma.08G218100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17721077-17723076 Glycine max
Glyma.08G218100 2.0kb downstream 2.0kb downstream 5386 true Chr08: 17723077-17728462 Glycine max
Glyma.08G218100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17726463-17728462 Glycine max
Glyma.08G218100 5.0kb upstream 5.0kb upstream 8386 true Chr08: 17718077-17726462 Glycine max
Glyma.08G218100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17718077-17723076 Glycine max
Glyma.08G218100 5.0kb downstream 5.0kb downstream 8386 true Chr08: 17723077-17731462 Glycine max
Glyma.08G218100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17726463-17731462 Glycine max
Glyma.08G218100 10.0kb upstream 10.0kb upstream 13386 true Chr08: 17713077-17726462 Glycine max
Glyma.08G218100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17713077-17723076 Glycine max
Glyma.08G218100 10.0kb downstream 10.0kb downstream 13386 true Chr08: 17723077-17736462 Glycine max
Glyma.08G218100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17726463-17736462 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041043 5273 Angiosperm View MSA
122310624 5265 Fabidae View MSA
124063767 5270 Rosid View MSA
123748181 5271 Pentapetalae View MSA
122792644 5272 Eudicot View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6195 0.0 16.8657    
cufflinks 1.70517 0.0 6.7859    
cufflinks 16.8372 0.0 69.6159   High
cufflinks 6.3935 0.0 27.995    
cufflinks 4.45431 0.0 13.4765    
cufflinks 8.53525 0.0 35.2907    
cufflinks 0.448241 0.0 3.54781   Low
cufflinks 5.60415 0.0 22.5687    
cufflinks 7.03637 0.0 24.0393    
cufflinks 0.979        
cufflinks 0.448        
cufflinks 3.706       High
cufflinks 0.179        
cufflinks 0.018     Low Low
cufflinks 0.577        
cufflinks 0.124        
cufflinks 3.13       High
cufflinks 0.365        
cufflinks 0.239        
cufflinks 0.131        
cufflinks 0.507        
cufflinks 0.202        
cufflinks 0.367        
cufflinks 0.633        
cufflinks 0.144        
cufflinks 1.347        

0 Strain