Gene : Glyma.08G205800 G. max Wm82.a2.v1

Defline:  (1 of 4) PTHR24089:SF270 - SOLUTE CARRIER FAMILY 25 MEMBER 48 Genomic Order:  2058
Name:  ? Glyma.08G205800 Secondary Identifier:  ? PAC:30540090

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G205800 0.5kb upstream 0.5kb upstream 4932 true Chr08: 16656467-16661398 Glycine max
Glyma.08G205800 0.5kb upstream 0.5kb upstream 500 false Chr08: 16660899-16661398 Glycine max
Glyma.08G205800 0.5kb downstream 0.5kb downstream 4932 true Chr08: 16655967-16660898 Glycine max
Glyma.08G205800 0.5kb downstream 0.5kb downstream 500 false Chr08: 16655967-16656466 Glycine max
Glyma.08G205800 1.0kb upstream 1.0kb upstream 5432 true Chr08: 16656467-16661898 Glycine max
Glyma.08G205800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16660899-16661898 Glycine max
Glyma.08G205800 1.0kb downstream 1.0kb downstream 5432 true Chr08: 16655467-16660898 Glycine max
Glyma.08G205800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16655467-16656466 Glycine max
Glyma.08G205800 2.0kb upstream 2.0kb upstream 6432 true Chr08: 16656467-16662898 Glycine max
Glyma.08G205800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16660899-16662898 Glycine max
Glyma.08G205800 2.0kb downstream 2.0kb downstream 6432 true Chr08: 16654467-16660898 Glycine max
Glyma.08G205800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16654467-16656466 Glycine max
Glyma.08G205800 5.0kb upstream 5.0kb upstream 9432 true Chr08: 16656467-16665898 Glycine max
Glyma.08G205800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16660899-16665898 Glycine max
Glyma.08G205800 5.0kb downstream 5.0kb downstream 9432 true Chr08: 16651467-16660898 Glycine max
Glyma.08G205800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16651467-16656466 Glycine max
Glyma.08G205800 10.0kb upstream 10.0kb upstream 14432 true Chr08: 16656467-16670898 Glycine max
Glyma.08G205800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16660899-16670898 Glycine max
Glyma.08G205800 10.0kb downstream 10.0kb downstream 14432 true Chr08: 16646467-16660898 Glycine max
Glyma.08G205800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16646467-16656466 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310669 5265 Fabidae View MSA
124060460 5270 Rosid View MSA
123737609 5271 Pentapetalae View MSA
122793075 5272 Eudicot View MSA
122045796 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349185 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.218905 0.0 0.841954    
cufflinks 0.075357 0.0 0.30202 Low  
cufflinks 1.39126 0.0 4.78891   High
cufflinks 0.102767 0.0 0.406813 Low  
cufflinks 0.0880606 0.0 0.35089 Low  
cufflinks 0.0481655 0.0 0.196926 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0130781 0.0 0.0590623 Low Low
cufflinks 0.529935 0.0 1.95751    
cufflinks 0.016     Low  
cufflinks 0.081        
cufflinks 0.566       High
cufflinks 0.19       High
cufflinks 0.03     Low  
cufflinks 0.004     Low Low
cufflinks 0.024     Low  
cufflinks 0.015     Low  
cufflinks 0.649       High
cufflinks 0.008     Low Low
cufflinks 0.028     Low  
cufflinks 0.016     Low  
cufflinks 0.018     Low  
cufflinks 0.134        
cufflinks 0.111        
cufflinks 0.031     Low  
cufflinks 0.021     Low  

0 Strain