Gene : Glyma.08G207900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31734:SF12 - AUXIN-RESPONSIVE PROTEIN IAA19-RELATED Genomic Order:  2079
Name:  ? Glyma.08G207900 Secondary Identifier:  ? PAC:30536298
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G207900 0.5kb upstream 0.5kb upstream 4951 true Chr08: 16812900-16817850 Glycine max
Glyma.08G207900 0.5kb upstream 0.5kb upstream 500 false Chr08: 16812900-16813399 Glycine max
Glyma.08G207900 0.5kb downstream 0.5kb downstream 4951 true Chr08: 16813400-16818350 Glycine max
Glyma.08G207900 0.5kb downstream 0.5kb downstream 500 false Chr08: 16817851-16818350 Glycine max
Glyma.08G207900 1.0kb upstream 1.0kb upstream 5451 true Chr08: 16812400-16817850 Glycine max
Glyma.08G207900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16812400-16813399 Glycine max
Glyma.08G207900 1.0kb downstream 1.0kb downstream 5451 true Chr08: 16813400-16818850 Glycine max
Glyma.08G207900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16817851-16818850 Glycine max
Glyma.08G207900 2.0kb upstream 2.0kb upstream 6451 true Chr08: 16811400-16817850 Glycine max
Glyma.08G207900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16811400-16813399 Glycine max
Glyma.08G207900 2.0kb downstream 2.0kb downstream 6451 true Chr08: 16813400-16819850 Glycine max
Glyma.08G207900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16817851-16819850 Glycine max
Glyma.08G207900 5.0kb upstream 5.0kb upstream 9451 true Chr08: 16808400-16817850 Glycine max
Glyma.08G207900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16808400-16813399 Glycine max
Glyma.08G207900 5.0kb downstream 5.0kb downstream 9451 true Chr08: 16813400-16822850 Glycine max
Glyma.08G207900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16817851-16822850 Glycine max
Glyma.08G207900 10.0kb upstream 10.0kb upstream 14451 true Chr08: 16803400-16817850 Glycine max
Glyma.08G207900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16803400-16813399 Glycine max
Glyma.08G207900 10.0kb downstream 10.0kb downstream 14451 true Chr08: 16813400-16827850 Glycine max
Glyma.08G207900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16817851-16827850 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310138 5265 Fabidae View MSA
124060642 5270 Rosid View MSA
123747255 5271 Pentapetalae View MSA
122788195 5272 Eudicot View MSA
122050292 5273 Angiosperm View MSA
121311842 5274 Embryophyte View MSA
123349083 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.40753 0.0 13.149    
cufflinks 7.31135 0.0 20.4702    
cufflinks 14.3035 0.0 38.3103   High
cufflinks 14.2132 0.0 38.1155   High
cufflinks 3.36636 0.0 10.456    
cufflinks 10.0826 0.0 27.5122    
cufflinks 1.27288 0.0 4.45709   Low
cufflinks 5.06698 0.0 14.8351    
cufflinks 3.12866 0.0 9.7794    
cufflinks 12.135     High High
cufflinks 0.3       Low
cufflinks 6.92        
cufflinks 1.3        
cufflinks 0.807        
cufflinks 6.626     High  
cufflinks 12.03     High High
cufflinks 1.146        
cufflinks 7.124        
cufflinks 2.703        
cufflinks 9.992     High High
cufflinks 0.567       Low
cufflinks 5.946        
cufflinks 3.402        
cufflinks 0.218       Low
cufflinks 10.365     High High
cufflinks 0.615       Low

0 Strain