Gene : Glyma.08G209500 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG1975 - mRNA cap methyltransferase Genomic Order:  2095
Name:  ? Glyma.08G209500 Secondary Identifier:  ? PAC:30538218
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G209500 0.5kb upstream 0.5kb upstream 7662 true Chr08: 16966464-16974125 Glycine max
Glyma.08G209500 0.5kb upstream 0.5kb upstream 500 false Chr08: 16966464-16966963 Glycine max
Glyma.08G209500 0.5kb downstream 0.5kb downstream 7662 true Chr08: 16966964-16974625 Glycine max
Glyma.08G209500 0.5kb downstream 0.5kb downstream 500 false Chr08: 16974126-16974625 Glycine max
Glyma.08G209500 1.0kb upstream 1.0kb upstream 8162 true Chr08: 16965964-16974125 Glycine max
Glyma.08G209500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16965964-16966963 Glycine max
Glyma.08G209500 1.0kb downstream 1.0kb downstream 8162 true Chr08: 16966964-16975125 Glycine max
Glyma.08G209500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16974126-16975125 Glycine max
Glyma.08G209500 2.0kb upstream 2.0kb upstream 9162 true Chr08: 16964964-16974125 Glycine max
Glyma.08G209500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16964964-16966963 Glycine max
Glyma.08G209500 2.0kb downstream 2.0kb downstream 9162 true Chr08: 16966964-16976125 Glycine max
Glyma.08G209500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16974126-16976125 Glycine max
Glyma.08G209500 5.0kb upstream 5.0kb upstream 12162 true Chr08: 16961964-16974125 Glycine max
Glyma.08G209500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16961964-16966963 Glycine max
Glyma.08G209500 5.0kb downstream 5.0kb downstream 12162 true Chr08: 16966964-16979125 Glycine max
Glyma.08G209500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16974126-16979125 Glycine max
Glyma.08G209500 10.0kb upstream 10.0kb upstream 17162 true Chr08: 16956964-16974125 Glycine max
Glyma.08G209500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16956964-16966963 Glycine max
Glyma.08G209500 10.0kb downstream 10.0kb downstream 17162 true Chr08: 16966964-16984125 Glycine max
Glyma.08G209500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16974126-16984125 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308883 5265 Fabidae View MSA
124060648 5270 Rosid View MSA
123738979 5271 Pentapetalae View MSA
122793076 5272 Eudicot View MSA
122041775 5273 Angiosperm View MSA
121344632 5274 Embryophyte View MSA
123428419 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.01252 0.0 20.1547   Low
cufflinks 6.58791 0.0 21.6042    
cufflinks 6.99376 0.0 23.3976    
cufflinks 6.68318 0.0 22.7089    
cufflinks 8.86457 0.0 27.6017   High
cufflinks 8.52745 0.0 26.7201   High
cufflinks 5.5911 0.0 19.1059   Low
cufflinks 8.08216 0.0 26.1143    
cufflinks 7.94607 0.0 26.1932    
cufflinks 0.669        
cufflinks 0.258       Low
cufflinks 0.749        
cufflinks 1.014       High
cufflinks 1.04       High
cufflinks 0.709        
cufflinks 0.538        
cufflinks 0.493        
cufflinks 0.933       High
cufflinks 0.791        
cufflinks 0.645        
cufflinks 0.357       Low
cufflinks 0.605        
cufflinks 0.519        
cufflinks 0.382       Low
cufflinks 0.565        
cufflinks 0.465        

0 Strain