Gene : Glyma.08G209600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11455:SF9 - (6-4)DNA PHOTOLYASE Genomic Order:  2096
Name:  ? Glyma.08G209600 Secondary Identifier:  ? PAC:30539953
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G209600 0.5kb upstream 0.5kb upstream 5061 true Chr08: 16974754-16979814 Glycine max
Glyma.08G209600 0.5kb upstream 0.5kb upstream 500 false Chr08: 16974754-16975253 Glycine max
Glyma.08G209600 0.5kb downstream 0.5kb downstream 5061 true Chr08: 16975254-16980314 Glycine max
Glyma.08G209600 0.5kb downstream 0.5kb downstream 500 false Chr08: 16979815-16980314 Glycine max
Glyma.08G209600 1.0kb upstream 1.0kb upstream 5561 true Chr08: 16974254-16979814 Glycine max
Glyma.08G209600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16974254-16975253 Glycine max
Glyma.08G209600 1.0kb downstream 1.0kb downstream 5561 true Chr08: 16975254-16980814 Glycine max
Glyma.08G209600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16979815-16980814 Glycine max
Glyma.08G209600 2.0kb upstream 2.0kb upstream 6561 true Chr08: 16973254-16979814 Glycine max
Glyma.08G209600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16973254-16975253 Glycine max
Glyma.08G209600 2.0kb downstream 2.0kb downstream 6561 true Chr08: 16975254-16981814 Glycine max
Glyma.08G209600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16979815-16981814 Glycine max
Glyma.08G209600 5.0kb upstream 5.0kb upstream 9561 true Chr08: 16970254-16979814 Glycine max
Glyma.08G209600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16970254-16975253 Glycine max
Glyma.08G209600 5.0kb downstream 5.0kb downstream 9561 true Chr08: 16975254-16984814 Glycine max
Glyma.08G209600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16979815-16984814 Glycine max
Glyma.08G209600 10.0kb upstream 10.0kb upstream 14561 true Chr08: 16965254-16979814 Glycine max
Glyma.08G209600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16965254-16975253 Glycine max
Glyma.08G209600 10.0kb downstream 10.0kb downstream 14561 true Chr08: 16975254-16989814 Glycine max
Glyma.08G209600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16979815-16989814 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301959 5265 Fabidae View MSA
124062043 5270 Rosid View MSA
123737581 5271 Pentapetalae View MSA
122791265 5272 Eudicot View MSA
122046460 5273 Angiosperm View MSA
121346822 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8827 0.0 37.8343   High
cufflinks 4.88434 0.0 19.3677    
cufflinks 7.80398 0.0 28.1709   High
cufflinks 4.04265 0.0 16.9172    
cufflinks 1.10147 0.0 5.88572    
cufflinks 3.80938 0.0 13.8815    
cufflinks 0.456516 0.0 2.15335   Low
cufflinks 2.71902 0.0 11.0901    
cufflinks 1.44331 0.0 5.31477    
cufflinks 0.294        
cufflinks 0.286        
cufflinks 1.184        
cufflinks 0.814        
cufflinks 0.237        
cufflinks 0.151       Low
cufflinks 1.393        
cufflinks 0.054     Low Low
cufflinks 1.203        
cufflinks 1.156        
cufflinks 0.915        
cufflinks 0.511        
cufflinks 1.167        
cufflinks 2.371       High
cufflinks 0.32        
cufflinks 1.224        
cufflinks 0.232        

0 Strain