Gene : Glyma.08G212600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31087:SF2 - PROTEIN LURP-ONE-RELATED 12-RELATED Genomic Order:  2126
Name:  ? Glyma.08G212600 Secondary Identifier:  ? PAC:30537013
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G212600 0.5kb upstream 0.5kb upstream 1812 true Chr08: 17146617-17148428 Glycine max
Glyma.08G212600 0.5kb upstream 0.5kb upstream 500 false Chr08: 17147929-17148428 Glycine max
Glyma.08G212600 0.5kb downstream 0.5kb downstream 1812 true Chr08: 17146117-17147928 Glycine max
Glyma.08G212600 0.5kb downstream 0.5kb downstream 500 false Chr08: 17146117-17146616 Glycine max
Glyma.08G212600 1.0kb upstream 1.0kb upstream 2312 true Chr08: 17146617-17148928 Glycine max
Glyma.08G212600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17147929-17148928 Glycine max
Glyma.08G212600 1.0kb downstream 1.0kb downstream 2312 true Chr08: 17145617-17147928 Glycine max
Glyma.08G212600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17145617-17146616 Glycine max
Glyma.08G212600 2.0kb upstream 2.0kb upstream 3312 true Chr08: 17146617-17149928 Glycine max
Glyma.08G212600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17147929-17149928 Glycine max
Glyma.08G212600 2.0kb downstream 2.0kb downstream 3312 true Chr08: 17144617-17147928 Glycine max
Glyma.08G212600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17144617-17146616 Glycine max
Glyma.08G212600 5.0kb upstream 5.0kb upstream 6312 true Chr08: 17146617-17152928 Glycine max
Glyma.08G212600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17147929-17152928 Glycine max
Glyma.08G212600 5.0kb downstream 5.0kb downstream 6312 true Chr08: 17141617-17147928 Glycine max
Glyma.08G212600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17141617-17146616 Glycine max
Glyma.08G212600 10.0kb upstream 10.0kb upstream 11312 true Chr08: 17146617-17157928 Glycine max
Glyma.08G212600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17147929-17157928 Glycine max
Glyma.08G212600 10.0kb downstream 10.0kb downstream 11312 true Chr08: 17136617-17147928 Glycine max
Glyma.08G212600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17136617-17146616 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029085 5273 Angiosperm View MSA
122298405 5265 Fabidae View MSA
124061618 5270 Rosid View MSA
123737880 5271 Pentapetalae View MSA
122787855 5272 Eudicot View MSA
121298484 5274 Embryophyte View MSA
123336456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.65154 0.0 14.5915    
cufflinks 9.54432 0.0 27.2241    
cufflinks 30.5884 0.0 81.6063 High High
cufflinks 6.28969 0.0 18.9133    
cufflinks 4.83543 0.0 15.019    
cufflinks 18.3925 0.0 49.6486   High
cufflinks 7.19869 0.0 21.1839    
cufflinks 15.0746 0.0 41.1616    
cufflinks 5.02333 0.0 15.5623    
cufflinks 8.853     High  
cufflinks 3.629        
cufflinks 26.399     High High
cufflinks 6.595        
cufflinks 1.476       Low
cufflinks 9.943     High  
cufflinks 8.293     High  
cufflinks 4.888        
cufflinks 4.08        
cufflinks 7.661     High  
cufflinks 5.068        
cufflinks 3.309        
cufflinks 6.598        
cufflinks 3.665        
cufflinks 2.683       Low
cufflinks 6.416        
cufflinks 4.14        

0 Strain