Gene : Glyma.08G246800 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG1613 - Exosomal 3'-5' exoribonuclease complex, subunit Rrp43 Genomic Order:  2468
Name:  ? Glyma.08G246800 Secondary Identifier:  ? PAC:30539164
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G246800 0.5kb upstream 0.5kb upstream 4509 true Chr08: 21366824-21371332 Glycine max
Glyma.08G246800 0.5kb upstream 0.5kb upstream 500 false Chr08: 21370833-21371332 Glycine max
Glyma.08G246800 0.5kb downstream 0.5kb downstream 4509 true Chr08: 21366324-21370832 Glycine max
Glyma.08G246800 0.5kb downstream 0.5kb downstream 500 false Chr08: 21366324-21366823 Glycine max
Glyma.08G246800 1.0kb upstream 1.0kb upstream 5009 true Chr08: 21366824-21371832 Glycine max
Glyma.08G246800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21370833-21371832 Glycine max
Glyma.08G246800 1.0kb downstream 1.0kb downstream 5009 true Chr08: 21365824-21370832 Glycine max
Glyma.08G246800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21365824-21366823 Glycine max
Glyma.08G246800 2.0kb upstream 2.0kb upstream 6009 true Chr08: 21366824-21372832 Glycine max
Glyma.08G246800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21370833-21372832 Glycine max
Glyma.08G246800 2.0kb downstream 2.0kb downstream 6009 true Chr08: 21364824-21370832 Glycine max
Glyma.08G246800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21364824-21366823 Glycine max
Glyma.08G246800 5.0kb upstream 5.0kb upstream 9009 true Chr08: 21366824-21375832 Glycine max
Glyma.08G246800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21370833-21375832 Glycine max
Glyma.08G246800 5.0kb downstream 5.0kb downstream 9009 true Chr08: 21361824-21370832 Glycine max
Glyma.08G246800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21361824-21366823 Glycine max
Glyma.08G246800 10.0kb upstream 10.0kb upstream 14009 true Chr08: 21366824-21380832 Glycine max
Glyma.08G246800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21370833-21380832 Glycine max
Glyma.08G246800 10.0kb downstream 10.0kb downstream 14009 true Chr08: 21356824-21370832 Glycine max
Glyma.08G246800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21356824-21366823 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041221 5273 Angiosperm View MSA
122299958 5265 Fabidae View MSA
124065383 5270 Rosid View MSA
123740592 5271 Pentapetalae View MSA
122791170 5272 Eudicot View MSA
121346499 5274 Embryophyte View MSA
123425842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.97042 0.0 23.1207    
cufflinks 11.2668 0.0 31.4178    
cufflinks 7.50048 0.0 21.8217   Low
cufflinks 9.36358 0.0 26.5846    
cufflinks 13.3402 0.0 36.6546    
cufflinks 31.8008 0.0 84.8878 High High
cufflinks 10.7266 0.0 30.0801    
cufflinks 11.9374 0.0 33.0646    
cufflinks 13.5376 0.0 37.1318    
cufflinks 2.637        
cufflinks 1.624        
cufflinks 2.367        
cufflinks 5.495       High
cufflinks 5.251       High
cufflinks 1.748        
cufflinks 1.876        
cufflinks 2.077        
cufflinks 1.836        
cufflinks 3.282       High
cufflinks 1.383       Low
cufflinks 1.71        
cufflinks 1.363       Low
cufflinks 1.66        
cufflinks 1.867        
cufflinks 1.653        
cufflinks 2.426        

0 Strain