Gene : Glyma.08G247500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31680:SF4 - PROTEIN LONGIFOLIA 1-RELATED Genomic Order:  2475
Name:  ? Glyma.08G247500 Secondary Identifier:  ? PAC:30538056
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G247500 0.5kb upstream 0.5kb upstream 6305 true Chr08: 21445203-21451507 Glycine max
Glyma.08G247500 0.5kb upstream 0.5kb upstream 500 false Chr08: 21451008-21451507 Glycine max
Glyma.08G247500 0.5kb downstream 0.5kb downstream 6305 true Chr08: 21444703-21451007 Glycine max
Glyma.08G247500 0.5kb downstream 0.5kb downstream 500 false Chr08: 21444703-21445202 Glycine max
Glyma.08G247500 1.0kb upstream 1.0kb upstream 6805 true Chr08: 21445203-21452007 Glycine max
Glyma.08G247500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21451008-21452007 Glycine max
Glyma.08G247500 1.0kb downstream 1.0kb downstream 6805 true Chr08: 21444203-21451007 Glycine max
Glyma.08G247500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21444203-21445202 Glycine max
Glyma.08G247500 2.0kb upstream 2.0kb upstream 7805 true Chr08: 21445203-21453007 Glycine max
Glyma.08G247500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21451008-21453007 Glycine max
Glyma.08G247500 2.0kb downstream 2.0kb downstream 7805 true Chr08: 21443203-21451007 Glycine max
Glyma.08G247500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21443203-21445202 Glycine max
Glyma.08G247500 5.0kb upstream 5.0kb upstream 10805 true Chr08: 21445203-21456007 Glycine max
Glyma.08G247500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21451008-21456007 Glycine max
Glyma.08G247500 5.0kb downstream 5.0kb downstream 10805 true Chr08: 21440203-21451007 Glycine max
Glyma.08G247500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21440203-21445202 Glycine max
Glyma.08G247500 10.0kb upstream 10.0kb upstream 15805 true Chr08: 21445203-21461007 Glycine max
Glyma.08G247500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21451008-21461007 Glycine max
Glyma.08G247500 10.0kb downstream 10.0kb downstream 15805 true Chr08: 21435203-21451007 Glycine max
Glyma.08G247500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21435203-21445202 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026676 5273 Angiosperm View MSA
122316112 5265 Fabidae View MSA
124071879 5270 Rosid View MSA
123746189 5271 Pentapetalae View MSA
122771811 5272 Eudicot View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.123638 0.0 0.612326 Low Low
cufflinks 1.98821 0.0 7.16093    
cufflinks 2.86475 0.0 9.33872    
cufflinks 2.3688 0.0 8.14339    
cufflinks 3.02035 0.0 11.4869    
cufflinks 1.47802 0.0 4.48783    
cufflinks 4.00113 0.0 14.5558   High
cufflinks 0.418518 0.0 1.81873    
cufflinks 0.763674 0.0 2.7499    
cufflinks 2.604        
cufflinks 0.12        
cufflinks 1.299        
cufflinks 1.472        
cufflinks 2.137        
cufflinks 0.005     Low Low
cufflinks 1.231        
cufflinks 0.077       Low
cufflinks 2.323        
cufflinks 0.924        
cufflinks 2.02        
cufflinks 0.34        
cufflinks 1.414        
cufflinks 0.762        
cufflinks 0.157        
cufflinks 1.338        
cufflinks 0.389        

0 Strain