Gene : Glyma.08G239300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10024:SF197 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  2393
Name:  ? Glyma.08G239300 Secondary Identifier:  ? PAC:30539473
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G239300 0.5kb upstream 0.5kb upstream 4421 true Chr08: 20427342-20431762 Glycine max
Glyma.08G239300 0.5kb upstream 0.5kb upstream 500 false Chr08: 20431263-20431762 Glycine max
Glyma.08G239300 0.5kb downstream 0.5kb downstream 4421 true Chr08: 20426842-20431262 Glycine max
Glyma.08G239300 0.5kb downstream 0.5kb downstream 500 false Chr08: 20426842-20427341 Glycine max
Glyma.08G239300 1.0kb upstream 1.0kb upstream 4921 true Chr08: 20427342-20432262 Glycine max
Glyma.08G239300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20431263-20432262 Glycine max
Glyma.08G239300 1.0kb downstream 1.0kb downstream 4921 true Chr08: 20426342-20431262 Glycine max
Glyma.08G239300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20426342-20427341 Glycine max
Glyma.08G239300 2.0kb upstream 2.0kb upstream 5921 true Chr08: 20427342-20433262 Glycine max
Glyma.08G239300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20431263-20433262 Glycine max
Glyma.08G239300 2.0kb downstream 2.0kb downstream 5921 true Chr08: 20425342-20431262 Glycine max
Glyma.08G239300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20425342-20427341 Glycine max
Glyma.08G239300 5.0kb upstream 5.0kb upstream 8921 true Chr08: 20427342-20436262 Glycine max
Glyma.08G239300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20431263-20436262 Glycine max
Glyma.08G239300 5.0kb downstream 5.0kb downstream 8921 true Chr08: 20422342-20431262 Glycine max
Glyma.08G239300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20422342-20427341 Glycine max
Glyma.08G239300 10.0kb upstream 10.0kb upstream 13921 true Chr08: 20427342-20441262 Glycine max
Glyma.08G239300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20431263-20441262 Glycine max
Glyma.08G239300 10.0kb downstream 10.0kb downstream 13921 true Chr08: 20417342-20431262 Glycine max
Glyma.08G239300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20417342-20427341 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026435 5273 Angiosperm View MSA
122301302 5265 Fabidae View MSA
124063760 5270 Rosid View MSA
123752822 5271 Pentapetalae View MSA
122787154 5272 Eudicot View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98258 0.0 15.9996    
cufflinks 5.66201 0.0 15.17    
cufflinks 11.5119 0.0 31.0208   High
cufflinks 14.4222 0.0 39.3934   High
cufflinks 5.02951 0.0 13.517    
cufflinks 2.11146 0.0 6.0968   Low
cufflinks 3.98804 0.0 10.843    
cufflinks 12.2154 0.0 33.0265   High
cufflinks 3.90575 0.0 10.6395    
cufflinks 9.812     High  
cufflinks 2.022       Low
cufflinks 8.49     High  
cufflinks 4.329        
cufflinks 2.405        
cufflinks 1.84       Low
cufflinks 7.599     High  
cufflinks 0.779       Low
cufflinks 17.95     High High
cufflinks 8.227     High  
cufflinks 9.047     High  
cufflinks 4.103        
cufflinks 9.599     High  
cufflinks 6.104        
cufflinks 2.026       Low
cufflinks 8.501     High  
cufflinks 2.744        

0 Strain