Gene : Glyma.08G242300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13169:SF4 - MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1-RELATED Genomic Order:  2423
Name:  ? Glyma.08G242300 Secondary Identifier:  ? PAC:30539220
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G242300 0.5kb upstream 0.5kb upstream 4209 true Chr08: 20705330-20709538 Glycine max
Glyma.08G242300 0.5kb upstream 0.5kb upstream 500 false Chr08: 20709039-20709538 Glycine max
Glyma.08G242300 0.5kb downstream 0.5kb downstream 4209 true Chr08: 20704830-20709038 Glycine max
Glyma.08G242300 0.5kb downstream 0.5kb downstream 500 false Chr08: 20704830-20705329 Glycine max
Glyma.08G242300 1.0kb upstream 1.0kb upstream 4709 true Chr08: 20705330-20710038 Glycine max
Glyma.08G242300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20709039-20710038 Glycine max
Glyma.08G242300 1.0kb downstream 1.0kb downstream 4709 true Chr08: 20704330-20709038 Glycine max
Glyma.08G242300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20704330-20705329 Glycine max
Glyma.08G242300 2.0kb upstream 2.0kb upstream 5709 true Chr08: 20705330-20711038 Glycine max
Glyma.08G242300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20709039-20711038 Glycine max
Glyma.08G242300 2.0kb downstream 2.0kb downstream 5709 true Chr08: 20703330-20709038 Glycine max
Glyma.08G242300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20703330-20705329 Glycine max
Glyma.08G242300 5.0kb upstream 5.0kb upstream 8709 true Chr08: 20705330-20714038 Glycine max
Glyma.08G242300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20709039-20714038 Glycine max
Glyma.08G242300 5.0kb downstream 5.0kb downstream 8709 true Chr08: 20700330-20709038 Glycine max
Glyma.08G242300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20700330-20705329 Glycine max
Glyma.08G242300 10.0kb upstream 10.0kb upstream 13709 true Chr08: 20705330-20719038 Glycine max
Glyma.08G242300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20709039-20719038 Glycine max
Glyma.08G242300 10.0kb downstream 10.0kb downstream 13709 true Chr08: 20695330-20709038 Glycine max
Glyma.08G242300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20695330-20705329 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314619 5265 Fabidae View MSA
124063015 5270 Rosid View MSA
123741686 5271 Pentapetalae View MSA
122788977 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.75374 0.0 27.3515    
cufflinks 8.54938 0.0 24.267   Low
cufflinks 9.63272 0.0 26.9591    
cufflinks 12.1825 0.0 33.435    
cufflinks 11.6956 0.0 32.2898    
cufflinks 16.9441 0.0 45.6415   High
cufflinks 9.62725 0.0 27.0744    
cufflinks 13.4289 0.0 36.5978    
cufflinks 10.8054 0.0 29.975    
cufflinks 3.257        
cufflinks 2.437        
cufflinks 3.517        
cufflinks 4.768       High
cufflinks 4.843       High
cufflinks 2.428        
cufflinks 2.844        
cufflinks 1.229       Low
cufflinks 6.042       High
cufflinks 3.031        
cufflinks 2.671        
cufflinks 2.767        
cufflinks 2.941        
cufflinks 2.798        
cufflinks 3.09        
cufflinks 2.885        
cufflinks 2.431        

0 Strain