Gene : Glyma.08G232100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Genomic Order:  2321
Name:  ? Glyma.08G232100 Secondary Identifier:  ? PAC:30540886
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G232100 0.5kb upstream 0.5kb upstream 7670 true Chr08: 19083679-19091348 Glycine max
Glyma.08G232100 0.5kb upstream 0.5kb upstream 500 false Chr08: 19090849-19091348 Glycine max
Glyma.08G232100 0.5kb downstream 0.5kb downstream 7670 true Chr08: 19083179-19090848 Glycine max
Glyma.08G232100 0.5kb downstream 0.5kb downstream 500 false Chr08: 19083179-19083678 Glycine max
Glyma.08G232100 1.0kb upstream 1.0kb upstream 8170 true Chr08: 19083679-19091848 Glycine max
Glyma.08G232100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19090849-19091848 Glycine max
Glyma.08G232100 1.0kb downstream 1.0kb downstream 8170 true Chr08: 19082679-19090848 Glycine max
Glyma.08G232100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19082679-19083678 Glycine max
Glyma.08G232100 2.0kb upstream 2.0kb upstream 9170 true Chr08: 19083679-19092848 Glycine max
Glyma.08G232100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19090849-19092848 Glycine max
Glyma.08G232100 2.0kb downstream 2.0kb downstream 9170 true Chr08: 19081679-19090848 Glycine max
Glyma.08G232100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19081679-19083678 Glycine max
Glyma.08G232100 5.0kb upstream 5.0kb upstream 12170 true Chr08: 19083679-19095848 Glycine max
Glyma.08G232100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19090849-19095848 Glycine max
Glyma.08G232100 5.0kb downstream 5.0kb downstream 12170 true Chr08: 19078679-19090848 Glycine max
Glyma.08G232100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19078679-19083678 Glycine max
Glyma.08G232100 10.0kb upstream 10.0kb upstream 17170 true Chr08: 19083679-19100848 Glycine max
Glyma.08G232100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19090849-19100848 Glycine max
Glyma.08G232100 10.0kb downstream 10.0kb downstream 17170 true Chr08: 19073679-19090848 Glycine max
Glyma.08G232100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19073679-19083678 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309593 5265 Fabidae View MSA
124069116 5270 Rosid View MSA
123736390 5271 Pentapetalae View MSA
122788335 5272 Eudicot View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.41822 0.0 7.40813    
cufflinks 0.17419 0.0 0.666062 Low  
cufflinks 22.843 0.0 62.1005 High High
cufflinks 0.272295 0.0 1.01978    
cufflinks 0.299837 0.0 1.11953    
cufflinks 0.116952 0.0 0.455015 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.528363 0.0 1.90825    
cufflinks 0.491588 0.0 1.78625    
cufflinks 0.621        
cufflinks 0.371        
cufflinks 12.638     High High
cufflinks 0.126        
cufflinks 0.026     Low  
cufflinks 0.158        
cufflinks 0.023     Low Low
cufflinks 1.364       High
cufflinks 0.288        
cufflinks 0.031     Low  
cufflinks 0.042     Low  
cufflinks 0.571        
cufflinks 0.029     Low  
cufflinks 0.015     Low Low
cufflinks 0.208        
cufflinks 0.028     Low  
cufflinks 0.521        

0 Strain