Gene : Glyma.08G255000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13634 - RIBOSOME BIOGENESIS PROTEIN BRIX Genomic Order:  2550
Name:  ? Glyma.08G255000 Secondary Identifier:  ? PAC:30538296
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G255000 0.5kb upstream 0.5kb upstream 4705 true Chr08: 22565075-22569779 Glycine max
Glyma.08G255000 0.5kb upstream 0.5kb upstream 500 false Chr08: 22569280-22569779 Glycine max
Glyma.08G255000 0.5kb downstream 0.5kb downstream 4705 true Chr08: 22564575-22569279 Glycine max
Glyma.08G255000 0.5kb downstream 0.5kb downstream 500 false Chr08: 22564575-22565074 Glycine max
Glyma.08G255000 1.0kb upstream 1.0kb upstream 5205 true Chr08: 22565075-22570279 Glycine max
Glyma.08G255000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22569280-22570279 Glycine max
Glyma.08G255000 1.0kb downstream 1.0kb downstream 5205 true Chr08: 22564075-22569279 Glycine max
Glyma.08G255000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22564075-22565074 Glycine max
Glyma.08G255000 2.0kb upstream 2.0kb upstream 6205 true Chr08: 22565075-22571279 Glycine max
Glyma.08G255000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22569280-22571279 Glycine max
Glyma.08G255000 2.0kb downstream 2.0kb downstream 6205 true Chr08: 22563075-22569279 Glycine max
Glyma.08G255000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22563075-22565074 Glycine max
Glyma.08G255000 5.0kb upstream 5.0kb upstream 9205 true Chr08: 22565075-22574279 Glycine max
Glyma.08G255000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22569280-22574279 Glycine max
Glyma.08G255000 5.0kb downstream 5.0kb downstream 9205 true Chr08: 22560075-22569279 Glycine max
Glyma.08G255000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22560075-22565074 Glycine max
Glyma.08G255000 10.0kb upstream 10.0kb upstream 14205 true Chr08: 22565075-22579279 Glycine max
Glyma.08G255000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22569280-22579279 Glycine max
Glyma.08G255000 10.0kb downstream 10.0kb downstream 14205 true Chr08: 22555075-22569279 Glycine max
Glyma.08G255000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22555075-22565074 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301161 5265 Fabidae View MSA
124066566 5270 Rosid View MSA
123743226 5271 Pentapetalae View MSA
122791953 5272 Eudicot View MSA
122044943 5273 Angiosperm View MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7798 0.0 81.8646 High  
cufflinks 21.0372 0.0 72.081 High  
cufflinks 11.207 0.0 34.6316   Low
cufflinks 19.3122 0.0 69.6905    
cufflinks 36.7623 0.0 131.626 High High
cufflinks 21.7516 0.0 74.3271    
cufflinks 23.9094 0.0 84.5541 High  
cufflinks 24.4466 0.0 86.0965 High  
cufflinks 26.1037 0.0 91.2811 High  
cufflinks 3.381        
cufflinks 0.686       Low
cufflinks 3.455        
cufflinks 8.153     High High
cufflinks 10.713     High High
cufflinks 0.966       Low
cufflinks 2.258        
cufflinks 2.345        
cufflinks 2.998        
cufflinks 3.891        
cufflinks 1.68        
cufflinks 1.682        
cufflinks 2.014        
cufflinks 3.723        
cufflinks 1.122       Low
cufflinks 2.015        
cufflinks 1.871        

0 Strain