Gene : Glyma.08G255200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED Genomic Order:  2552
Name:  ? Glyma.08G255200 Secondary Identifier:  ? PAC:30538033
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G255200 0.5kb upstream 0.5kb upstream 3213 true Chr08: 22599514-22602726 Glycine max
Glyma.08G255200 0.5kb upstream 0.5kb upstream 500 false Chr08: 22602227-22602726 Glycine max
Glyma.08G255200 0.5kb downstream 0.5kb downstream 3213 true Chr08: 22599014-22602226 Glycine max
Glyma.08G255200 0.5kb downstream 0.5kb downstream 500 false Chr08: 22599014-22599513 Glycine max
Glyma.08G255200 1.0kb upstream 1.0kb upstream 3713 true Chr08: 22599514-22603226 Glycine max
Glyma.08G255200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22602227-22603226 Glycine max
Glyma.08G255200 1.0kb downstream 1.0kb downstream 3713 true Chr08: 22598514-22602226 Glycine max
Glyma.08G255200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22598514-22599513 Glycine max
Glyma.08G255200 2.0kb upstream 2.0kb upstream 4713 true Chr08: 22599514-22604226 Glycine max
Glyma.08G255200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22602227-22604226 Glycine max
Glyma.08G255200 2.0kb downstream 2.0kb downstream 4713 true Chr08: 22597514-22602226 Glycine max
Glyma.08G255200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22597514-22599513 Glycine max
Glyma.08G255200 5.0kb upstream 5.0kb upstream 7713 true Chr08: 22599514-22607226 Glycine max
Glyma.08G255200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22602227-22607226 Glycine max
Glyma.08G255200 5.0kb downstream 5.0kb downstream 7713 true Chr08: 22594514-22602226 Glycine max
Glyma.08G255200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22594514-22599513 Glycine max
Glyma.08G255200 10.0kb upstream 10.0kb upstream 12713 true Chr08: 22599514-22612226 Glycine max
Glyma.08G255200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22602227-22612226 Glycine max
Glyma.08G255200 10.0kb downstream 10.0kb downstream 12713 true Chr08: 22589514-22602226 Glycine max
Glyma.08G255200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22589514-22599513 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303111 5265 Fabidae View MSA
124065921 5270 Rosid View MSA
123752107 5271 Pentapetalae View MSA
122792098 5272 Eudicot View MSA
122049836 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121345556 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.6914 0.0 173.84 High High
cufflinks 5.88657 0.0 17.2353    
cufflinks 1.1554 0.0 4.13052    
cufflinks 3.0492 0.0 9.78568    
cufflinks 0.267062 0.0 1.02506    
cufflinks 0.144349 0.0 0.56875 Low  
cufflinks 0.039561 0.0 0.165191 Low Low
cufflinks 2.55917 0.0 8.39531    
cufflinks 0.153817 0.0 0.604523 Low  
cufflinks 4.566        
cufflinks 0.007     Low Low
cufflinks 0.987        
cufflinks 0.019     Low  
cufflinks 0.018     Low  
cufflinks 0.112        
cufflinks 28.539     High High
cufflinks 0.012     Low Low
cufflinks 0.656        
cufflinks 4.035        
cufflinks 26.716     High High
cufflinks 0.009     Low Low
cufflinks 25.477     High High
cufflinks 12.611     High  
cufflinks 0.014     Low Low
cufflinks 38.873     High High
cufflinks 0.02     Low  

0 Strain