Gene : Glyma.08G256100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14083 - YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN Genomic Order:  2561
Name:  ? Glyma.08G256100 Secondary Identifier:  ? PAC:30537261
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G256100 0.5kb upstream 0.5kb upstream 4694 true Chr08: 22783536-22788229 Glycine max
Glyma.08G256100 0.5kb upstream 0.5kb upstream 500 false Chr08: 22787730-22788229 Glycine max
Glyma.08G256100 0.5kb downstream 0.5kb downstream 4694 true Chr08: 22783036-22787729 Glycine max
Glyma.08G256100 0.5kb downstream 0.5kb downstream 500 false Chr08: 22783036-22783535 Glycine max
Glyma.08G256100 1.0kb upstream 1.0kb upstream 5194 true Chr08: 22783536-22788729 Glycine max
Glyma.08G256100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22787730-22788729 Glycine max
Glyma.08G256100 1.0kb downstream 1.0kb downstream 5194 true Chr08: 22782536-22787729 Glycine max
Glyma.08G256100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22782536-22783535 Glycine max
Glyma.08G256100 2.0kb upstream 2.0kb upstream 6194 true Chr08: 22783536-22789729 Glycine max
Glyma.08G256100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22787730-22789729 Glycine max
Glyma.08G256100 2.0kb downstream 2.0kb downstream 6194 true Chr08: 22781536-22787729 Glycine max
Glyma.08G256100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22781536-22783535 Glycine max
Glyma.08G256100 5.0kb upstream 5.0kb upstream 9194 true Chr08: 22783536-22792729 Glycine max
Glyma.08G256100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22787730-22792729 Glycine max
Glyma.08G256100 5.0kb downstream 5.0kb downstream 9194 true Chr08: 22778536-22787729 Glycine max
Glyma.08G256100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22778536-22783535 Glycine max
Glyma.08G256100 10.0kb upstream 10.0kb upstream 14194 true Chr08: 22783536-22797729 Glycine max
Glyma.08G256100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22787730-22797729 Glycine max
Glyma.08G256100 10.0kb downstream 10.0kb downstream 14194 true Chr08: 22773536-22787729 Glycine max
Glyma.08G256100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22773536-22783535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314799 5265 Fabidae View MSA
124072986 5270 Rosid View MSA
123752428 5271 Pentapetalae View MSA
122785612 5272 Eudicot View MSA
122043920 5273 Angiosperm View MSA
121346017 5274 Embryophyte View MSA
123427563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.23594 0.0 35.4888    
cufflinks 7.78165 0.0 29.0496    
cufflinks 6.18737 0.0 25.1728   Low
cufflinks 9.84855 0.0 39.3758    
cufflinks 9.93483 0.0 40.4413    
cufflinks 9.82723 0.0 39.3944    
cufflinks 8.49739 0.0 35.6745    
cufflinks 9.63331 0.0 39.4343    
cufflinks 8.14897 0.0 34.8926    
cufflinks 1.33        
cufflinks 1.201        
cufflinks 1.014        
cufflinks 1.435        
cufflinks 2.054       High
cufflinks 0.47       Low
cufflinks 0.91        
cufflinks 1.144        
cufflinks 1.157        
cufflinks 1.306        
cufflinks 0.843        
cufflinks 1.198        
cufflinks 0.919        
cufflinks 1.175        
cufflinks 1.335        
cufflinks 0.734       Low
cufflinks 1.112        

0 Strain