Gene : Glyma.08G257600 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00169//PF01412//PF03114//PF13857 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (many copies) (Ank_5) Genomic Order:  2576
Name:  ? Glyma.08G257600 Secondary Identifier:  ? PAC:30536548
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G257600 0.5kb upstream 0.5kb upstream 10520 true Chr08: 23143598-23154117 Glycine max
Glyma.08G257600 0.5kb upstream 0.5kb upstream 500 false Chr08: 23143598-23144097 Glycine max
Glyma.08G257600 0.5kb downstream 0.5kb downstream 10520 true Chr08: 23144098-23154617 Glycine max
Glyma.08G257600 0.5kb downstream 0.5kb downstream 500 false Chr08: 23154118-23154617 Glycine max
Glyma.08G257600 1.0kb upstream 1.0kb upstream 11020 true Chr08: 23143098-23154117 Glycine max
Glyma.08G257600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 23143098-23144097 Glycine max
Glyma.08G257600 1.0kb downstream 1.0kb downstream 11020 true Chr08: 23144098-23155117 Glycine max
Glyma.08G257600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 23154118-23155117 Glycine max
Glyma.08G257600 2.0kb upstream 2.0kb upstream 12020 true Chr08: 23142098-23154117 Glycine max
Glyma.08G257600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 23142098-23144097 Glycine max
Glyma.08G257600 2.0kb downstream 2.0kb downstream 12020 true Chr08: 23144098-23156117 Glycine max
Glyma.08G257600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 23154118-23156117 Glycine max
Glyma.08G257600 5.0kb upstream 5.0kb upstream 15020 true Chr08: 23139098-23154117 Glycine max
Glyma.08G257600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 23139098-23144097 Glycine max
Glyma.08G257600 5.0kb downstream 5.0kb downstream 15020 true Chr08: 23144098-23159117 Glycine max
Glyma.08G257600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 23154118-23159117 Glycine max
Glyma.08G257600 10.0kb upstream 10.0kb upstream 20020 true Chr08: 23134098-23154117 Glycine max
Glyma.08G257600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 23134098-23144097 Glycine max
Glyma.08G257600 10.0kb downstream 10.0kb downstream 20020 true Chr08: 23144098-23164117 Glycine max
Glyma.08G257600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 23154118-23164117 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305968 5265 Fabidae View MSA
124066460 5270 Rosid View MSA
123753226 5271 Pentapetalae View MSA
122787909 5272 Eudicot View MSA
122045585 5273 Angiosperm View MSA
121349656 5274 Embryophyte View MSA
123428285 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.30107 0.0 23.3673   Low
cufflinks 13.1948 0.0 56.9043    
cufflinks 6.87941 0.0 29.7501    
cufflinks 12.7 0.0 57.3354    
cufflinks 9.00521 0.0 38.071    
cufflinks 7.06626 0.0 30.6828    
cufflinks 24.542 0.0 119.9 High High
cufflinks 13.2234 0.0 52.002    
cufflinks 9.48802 0.0 40.2131    
cufflinks 1.137        
cufflinks 0.16       Low
cufflinks 0.89        
cufflinks 1.01        
cufflinks 1.026        
cufflinks 0.206       Low
cufflinks 1.07        
cufflinks 0.426        
cufflinks 1.307        
cufflinks 1.356        
cufflinks 1.067        
cufflinks 0.313       Low
cufflinks 1.119        
cufflinks 1.186        
cufflinks 0.305       Low
cufflinks 1.007        
cufflinks 0.35        

0 Strain