Gene : Glyma.08G299900 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  2999
Name:  ? Glyma.08G299900 Secondary Identifier:  ? PAC:30536841
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7601 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G299900 0.5kb upstream 0.5kb upstream 3407 true Chr08: 41806129-41809535 Glycine max
Glyma.08G299900 0.5kb upstream 0.5kb upstream 500 false Chr08: 41806129-41806628 Glycine max
Glyma.08G299900 0.5kb downstream 0.5kb downstream 3407 true Chr08: 41806629-41810035 Glycine max
Glyma.08G299900 0.5kb downstream 0.5kb downstream 500 false Chr08: 41809536-41810035 Glycine max
Glyma.08G299900 1.0kb upstream 1.0kb upstream 3907 true Chr08: 41805629-41809535 Glycine max
Glyma.08G299900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41805629-41806628 Glycine max
Glyma.08G299900 1.0kb downstream 1.0kb downstream 3907 true Chr08: 41806629-41810535 Glycine max
Glyma.08G299900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41809536-41810535 Glycine max
Glyma.08G299900 2.0kb upstream 2.0kb upstream 4907 true Chr08: 41804629-41809535 Glycine max
Glyma.08G299900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41804629-41806628 Glycine max
Glyma.08G299900 2.0kb downstream 2.0kb downstream 4907 true Chr08: 41806629-41811535 Glycine max
Glyma.08G299900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41809536-41811535 Glycine max
Glyma.08G299900 5.0kb upstream 5.0kb upstream 7907 true Chr08: 41801629-41809535 Glycine max
Glyma.08G299900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41801629-41806628 Glycine max
Glyma.08G299900 5.0kb downstream 5.0kb downstream 7907 true Chr08: 41806629-41814535 Glycine max
Glyma.08G299900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41809536-41814535 Glycine max
Glyma.08G299900 10.0kb upstream 10.0kb upstream 12907 true Chr08: 41796629-41809535 Glycine max
Glyma.08G299900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41796629-41806628 Glycine max
Glyma.08G299900 10.0kb downstream 10.0kb downstream 12907 true Chr08: 41806629-41819535 Glycine max
Glyma.08G299900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41809536-41819535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122310948 5265 Fabidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.4327 0.0 212.288 High  
cufflinks 14.2379 0.0 38.0103    
cufflinks 147.431 0.0 549.213 High High
cufflinks 4.76347 0.0 13.3238   Low
cufflinks 23.9167 0.0 65.0854 High  
cufflinks 92.7276 0.0 306.682 High High
cufflinks 4.97773 0.0 13.8939   Low
cufflinks 17.5098 0.0 46.9822    
cufflinks 16.3169 0.0 43.6796    
cufflinks 37.104     High  
cufflinks 70.808     High High
cufflinks 26.994     High  
cufflinks 47.954     High  
cufflinks 39.674     High  
cufflinks 21.661     High  
cufflinks 19.836     High  
cufflinks 87.073     High High
cufflinks 31.281     High  
cufflinks 16.418     High Low
cufflinks 12.888     High Low
cufflinks 35.297     High  
cufflinks 19.605     High  
cufflinks 22.213     High  
cufflinks 88.165     High High
cufflinks 16.101     High Low
cufflinks 69.772     High High

0 Strain