Gene : Glyma.08G303000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24031//PTHR24031:SF296 - RNA HELICASE Genomic Order:  3030
Name:  ? Glyma.08G303000 Secondary Identifier:  ? PAC:30540160
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G303000 0.5kb upstream 0.5kb upstream 7939 true Chr08: 42113746-42121684 Glycine max
Glyma.08G303000 0.5kb upstream 0.5kb upstream 500 false Chr08: 42113746-42114245 Glycine max
Glyma.08G303000 0.5kb downstream 0.5kb downstream 7939 true Chr08: 42114246-42122184 Glycine max
Glyma.08G303000 0.5kb downstream 0.5kb downstream 500 false Chr08: 42121685-42122184 Glycine max
Glyma.08G303000 1.0kb upstream 1.0kb upstream 8439 true Chr08: 42113246-42121684 Glycine max
Glyma.08G303000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42113246-42114245 Glycine max
Glyma.08G303000 1.0kb downstream 1.0kb downstream 8439 true Chr08: 42114246-42122684 Glycine max
Glyma.08G303000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42121685-42122684 Glycine max
Glyma.08G303000 2.0kb upstream 2.0kb upstream 9439 true Chr08: 42112246-42121684 Glycine max
Glyma.08G303000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42112246-42114245 Glycine max
Glyma.08G303000 2.0kb downstream 2.0kb downstream 9439 true Chr08: 42114246-42123684 Glycine max
Glyma.08G303000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42121685-42123684 Glycine max
Glyma.08G303000 5.0kb upstream 5.0kb upstream 12439 true Chr08: 42109246-42121684 Glycine max
Glyma.08G303000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42109246-42114245 Glycine max
Glyma.08G303000 5.0kb downstream 5.0kb downstream 12439 true Chr08: 42114246-42126684 Glycine max
Glyma.08G303000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42121685-42126684 Glycine max
Glyma.08G303000 10.0kb upstream 10.0kb upstream 17439 true Chr08: 42104246-42121684 Glycine max
Glyma.08G303000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42104246-42114245 Glycine max
Glyma.08G303000 10.0kb downstream 10.0kb downstream 17439 true Chr08: 42114246-42131684 Glycine max
Glyma.08G303000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42121685-42131684 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296487 5265 Fabidae View MSA
124035664 5270 Rosid View MSA
123751668 5271 Pentapetalae View MSA
122790470 5272 Eudicot View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3298 0.0 43.7939   High
cufflinks 3.92821 0.0 16.001    
cufflinks 2.00168 0.0 8.7598   Low
cufflinks 4.00767 0.0 14.2024    
cufflinks 13.6692 0.0 48.1452   High
cufflinks 6.9519 0.0 25.0955    
cufflinks 3.79786 0.0 13.1176    
cufflinks 5.05831 0.0 17.0994    
cufflinks 7.45551 0.0 26.9236    
cufflinks 0.345        
cufflinks 0.134        
cufflinks 0.517        
cufflinks 2.634       High
cufflinks 3.71       High
cufflinks 0.153        
cufflinks 0.201        
cufflinks 0.297        
cufflinks 0.435        
cufflinks 0.776        
cufflinks 0.084     Low Low
cufflinks 0.22        
cufflinks 0.105       Low
cufflinks 0.326        
cufflinks 0.139        
cufflinks 0.133        
cufflinks 0.414        

0 Strain