Gene : Glyma.08G303800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10742:SF238 - POLYAMINE OXIDASE 3-RELATED Genomic Order:  3038
Name:  ? Glyma.08G303800 Secondary Identifier:  ? PAC:30540029
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6441 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G303800 0.5kb upstream 0.5kb upstream 6122 true Chr08: 42174238-42180359 Glycine max
Glyma.08G303800 0.5kb upstream 0.5kb upstream 500 false Chr08: 42179860-42180359 Glycine max
Glyma.08G303800 0.5kb downstream 0.5kb downstream 6122 true Chr08: 42173738-42179859 Glycine max
Glyma.08G303800 0.5kb downstream 0.5kb downstream 500 false Chr08: 42173738-42174237 Glycine max
Glyma.08G303800 1.0kb upstream 1.0kb upstream 6622 true Chr08: 42174238-42180859 Glycine max
Glyma.08G303800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42179860-42180859 Glycine max
Glyma.08G303800 1.0kb downstream 1.0kb downstream 6622 true Chr08: 42173238-42179859 Glycine max
Glyma.08G303800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42173238-42174237 Glycine max
Glyma.08G303800 2.0kb upstream 2.0kb upstream 7622 true Chr08: 42174238-42181859 Glycine max
Glyma.08G303800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42179860-42181859 Glycine max
Glyma.08G303800 2.0kb downstream 2.0kb downstream 7622 true Chr08: 42172238-42179859 Glycine max
Glyma.08G303800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42172238-42174237 Glycine max
Glyma.08G303800 5.0kb upstream 5.0kb upstream 10622 true Chr08: 42174238-42184859 Glycine max
Glyma.08G303800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42179860-42184859 Glycine max
Glyma.08G303800 5.0kb downstream 5.0kb downstream 10622 true Chr08: 42169238-42179859 Glycine max
Glyma.08G303800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42169238-42174237 Glycine max
Glyma.08G303800 10.0kb upstream 10.0kb upstream 15622 true Chr08: 42174238-42189859 Glycine max
Glyma.08G303800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42179860-42189859 Glycine max
Glyma.08G303800 10.0kb downstream 10.0kb downstream 15622 true Chr08: 42164238-42179859 Glycine max
Glyma.08G303800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42164238-42174237 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310798 5265 Fabidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.6254 0.0 306.464 High  
cufflinks 36.5145 0.0 158.575 High  
cufflinks 54.107 0.0 258.812 High  
cufflinks 66.7439 0.0 307.559 High High
cufflinks 15.9269 0.0 63.2543    
cufflinks 27.5219 0.0 111.969 High  
cufflinks 6.38169 0.0 24.8326   Low
cufflinks 52.5847 0.0 249.356 High  
cufflinks 17.8255 0.0 70.1256    
cufflinks 14.223     High High
cufflinks 3.739        
cufflinks 7.944     High  
cufflinks 1.74       Low
cufflinks 1.581       Low
cufflinks 5.685     High  
cufflinks 3.176        
cufflinks 2.785        
cufflinks 11.379     High High
cufflinks 9.25     High High
cufflinks 3.813        
cufflinks 3.282        
cufflinks 4.119        
cufflinks 10.335     High High
cufflinks 6.001        
cufflinks 3.935        
cufflinks 2.776        

0 Strain