Gene : Glyma.08G307800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11941:SF94 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  3078
Name:  ? Glyma.08G307800 Secondary Identifier:  ? PAC:30539691
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7574 Glycine max pathologic  
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G307800 0.5kb upstream 0.5kb upstream 5873 true Chr08: 42608438-42614310 Glycine max
Glyma.08G307800 0.5kb upstream 0.5kb upstream 500 false Chr08: 42608438-42608937 Glycine max
Glyma.08G307800 0.5kb downstream 0.5kb downstream 5873 true Chr08: 42608938-42614810 Glycine max
Glyma.08G307800 0.5kb downstream 0.5kb downstream 500 false Chr08: 42614311-42614810 Glycine max
Glyma.08G307800 1.0kb upstream 1.0kb upstream 6373 true Chr08: 42607938-42614310 Glycine max
Glyma.08G307800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42607938-42608937 Glycine max
Glyma.08G307800 1.0kb downstream 1.0kb downstream 6373 true Chr08: 42608938-42615310 Glycine max
Glyma.08G307800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42614311-42615310 Glycine max
Glyma.08G307800 2.0kb upstream 2.0kb upstream 7373 true Chr08: 42606938-42614310 Glycine max
Glyma.08G307800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42606938-42608937 Glycine max
Glyma.08G307800 2.0kb downstream 2.0kb downstream 7373 true Chr08: 42608938-42616310 Glycine max
Glyma.08G307800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42614311-42616310 Glycine max
Glyma.08G307800 5.0kb upstream 5.0kb upstream 10373 true Chr08: 42603938-42614310 Glycine max
Glyma.08G307800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42603938-42608937 Glycine max
Glyma.08G307800 5.0kb downstream 5.0kb downstream 10373 true Chr08: 42608938-42619310 Glycine max
Glyma.08G307800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42614311-42619310 Glycine max
Glyma.08G307800 10.0kb upstream 10.0kb upstream 15373 true Chr08: 42598938-42614310 Glycine max
Glyma.08G307800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42598938-42608937 Glycine max
Glyma.08G307800 10.0kb downstream 10.0kb downstream 15373 true Chr08: 42608938-42624310 Glycine max
Glyma.08G307800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42614311-42624310 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306191 5265 Fabidae View MSA
124061384 5270 Rosid View MSA
123736609 5271 Pentapetalae View MSA
122789369 5272 Eudicot View MSA
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3944 0.0 70.9658    
cufflinks 14.5461 0.0 51.3595    
cufflinks 12.9232 0.0 45.8425    
cufflinks 23.6953 0.0 82.3534 High  
cufflinks 12.0558 0.0 43.5743    
cufflinks 47.366 0.0 178.395 High High
cufflinks 16.7183 0.0 64.5133    
cufflinks 12.5854 0.0 45.1044    
cufflinks 20.9249 0.0 72.5777 High  
cufflinks 1.648        
cufflinks 0.724       Low
cufflinks 1.953        
cufflinks 4.859       High
cufflinks 2.507        
cufflinks 0.425       Low
cufflinks 1.45        
cufflinks 2.519        
cufflinks 1.835        
cufflinks 2.366        
cufflinks 1.183        
cufflinks 1.121        
cufflinks 1.393        
cufflinks 1.37        
cufflinks 1.805        
cufflinks 1.382        
cufflinks 2.307        

0 Strain