Gene : Glyma.08G290600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11119:SF50 - NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED Genomic Order:  2906
Name:  ? Glyma.08G290600 Secondary Identifier:  ? PAC:30538016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G290600 0.5kb upstream 0.5kb upstream 5798 true Chr08: 40420190-40425987 Glycine max
Glyma.08G290600 0.5kb upstream 0.5kb upstream 500 false Chr08: 40420190-40420689 Glycine max
Glyma.08G290600 0.5kb downstream 0.5kb downstream 5798 true Chr08: 40420690-40426487 Glycine max
Glyma.08G290600 0.5kb downstream 0.5kb downstream 500 false Chr08: 40425988-40426487 Glycine max
Glyma.08G290600 1.0kb upstream 1.0kb upstream 6298 true Chr08: 40419690-40425987 Glycine max
Glyma.08G290600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40419690-40420689 Glycine max
Glyma.08G290600 1.0kb downstream 1.0kb downstream 6298 true Chr08: 40420690-40426987 Glycine max
Glyma.08G290600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40425988-40426987 Glycine max
Glyma.08G290600 2.0kb upstream 2.0kb upstream 7298 true Chr08: 40418690-40425987 Glycine max
Glyma.08G290600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40418690-40420689 Glycine max
Glyma.08G290600 2.0kb downstream 2.0kb downstream 7298 true Chr08: 40420690-40427987 Glycine max
Glyma.08G290600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40425988-40427987 Glycine max
Glyma.08G290600 5.0kb upstream 5.0kb upstream 10298 true Chr08: 40415690-40425987 Glycine max
Glyma.08G290600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40415690-40420689 Glycine max
Glyma.08G290600 5.0kb downstream 5.0kb downstream 10298 true Chr08: 40420690-40430987 Glycine max
Glyma.08G290600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40425988-40430987 Glycine max
Glyma.08G290600 10.0kb upstream 10.0kb upstream 15298 true Chr08: 40410690-40425987 Glycine max
Glyma.08G290600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40410690-40420689 Glycine max
Glyma.08G290600 10.0kb downstream 10.0kb downstream 15298 true Chr08: 40420690-40435987 Glycine max
Glyma.08G290600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40425988-40435987 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301875 5265 Fabidae View MSA
124072472 5270 Rosid View MSA
123738745 5271 Pentapetalae View MSA
122794781 5272 Eudicot View MSA
122049429 5273 Angiosperm View MSA
121311395 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.233814 0.0 1.11706   Low
cufflinks 0.965036 0.0 4.19849    
cufflinks 0.294669 0.0 1.46196   Low
cufflinks 0.503364 0.0 2.34026    
cufflinks 4.11811 0.0 17.5969   High
cufflinks 1.11423 0.0 4.51841    
cufflinks 0.507291 0.0 3.16986    
cufflinks 3.88594 0.0 14.3766   High
cufflinks 2.70924 0.0 11.5792    
cufflinks 1.824       High
cufflinks 0.304        
cufflinks 0.114     Low  
cufflinks 1.516       High
cufflinks 1.394       High
cufflinks 0.013     Low Low
cufflinks 0.328        
cufflinks 1.334       High
cufflinks 0.316        
cufflinks 0.154        
cufflinks 0.266        
cufflinks 0.43        
cufflinks 0.257        
cufflinks 0.298        
cufflinks 0.253        
cufflinks 0.238        
cufflinks 0.747        

0 Strain