Gene : Glyma.08G291900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR23201//PTHR23201:SF18 - EXTENSIN, PROLINE-RICH PROTEIN Genomic Order:  2919
Name:  ? Glyma.08G291900 Secondary Identifier:  ? PAC:30541059
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G291900 0.5kb upstream 0.5kb upstream 2669 true Chr08: 40588498-40591166 Glycine max
Glyma.08G291900 0.5kb upstream 0.5kb upstream 500 false Chr08: 40590667-40591166 Glycine max
Glyma.08G291900 0.5kb downstream 0.5kb downstream 2669 true Chr08: 40587998-40590666 Glycine max
Glyma.08G291900 0.5kb downstream 0.5kb downstream 500 false Chr08: 40587998-40588497 Glycine max
Glyma.08G291900 1.0kb upstream 1.0kb upstream 3169 true Chr08: 40588498-40591666 Glycine max
Glyma.08G291900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40590667-40591666 Glycine max
Glyma.08G291900 1.0kb downstream 1.0kb downstream 3169 true Chr08: 40587498-40590666 Glycine max
Glyma.08G291900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40587498-40588497 Glycine max
Glyma.08G291900 2.0kb upstream 2.0kb upstream 4169 true Chr08: 40588498-40592666 Glycine max
Glyma.08G291900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40590667-40592666 Glycine max
Glyma.08G291900 2.0kb downstream 2.0kb downstream 4169 true Chr08: 40586498-40590666 Glycine max
Glyma.08G291900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40586498-40588497 Glycine max
Glyma.08G291900 5.0kb upstream 5.0kb upstream 7169 true Chr08: 40588498-40595666 Glycine max
Glyma.08G291900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40590667-40595666 Glycine max
Glyma.08G291900 5.0kb downstream 5.0kb downstream 7169 true Chr08: 40583498-40590666 Glycine max
Glyma.08G291900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40583498-40588497 Glycine max
Glyma.08G291900 10.0kb upstream 10.0kb upstream 12169 true Chr08: 40588498-40600666 Glycine max
Glyma.08G291900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40590667-40600666 Glycine max
Glyma.08G291900 10.0kb downstream 10.0kb downstream 12169 true Chr08: 40578498-40590666 Glycine max
Glyma.08G291900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40578498-40588497 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310487 5265 Fabidae View MSA
124073806 5270 Rosid View MSA
123751873 5271 Pentapetalae View MSA
122795637 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0242702 0.0 0.114828 Low Low
cufflinks 5.71515 0.0 19.072    
cufflinks 1.05124 0.0 3.96667    
cufflinks 0.147705 0.0 0.603898 Low  
cufflinks 1511.55 0.0 7306.96 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.079        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain