Gene : Glyma.08G285500 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Genomic Order:  2855
Name:  ? Glyma.08G285500 Secondary Identifier:  ? PAC:30538764
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5837 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G285500 0.5kb upstream 0.5kb upstream 5336 true Chr08: 39521349-39526684 Glycine max
Glyma.08G285500 0.5kb upstream 0.5kb upstream 500 false Chr08: 39521349-39521848 Glycine max
Glyma.08G285500 0.5kb downstream 0.5kb downstream 5336 true Chr08: 39521849-39527184 Glycine max
Glyma.08G285500 0.5kb downstream 0.5kb downstream 500 false Chr08: 39526685-39527184 Glycine max
Glyma.08G285500 1.0kb upstream 1.0kb upstream 5836 true Chr08: 39520849-39526684 Glycine max
Glyma.08G285500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 39520849-39521848 Glycine max
Glyma.08G285500 1.0kb downstream 1.0kb downstream 5836 true Chr08: 39521849-39527684 Glycine max
Glyma.08G285500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 39526685-39527684 Glycine max
Glyma.08G285500 2.0kb upstream 2.0kb upstream 6836 true Chr08: 39519849-39526684 Glycine max
Glyma.08G285500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 39519849-39521848 Glycine max
Glyma.08G285500 2.0kb downstream 2.0kb downstream 6836 true Chr08: 39521849-39528684 Glycine max
Glyma.08G285500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 39526685-39528684 Glycine max
Glyma.08G285500 5.0kb upstream 5.0kb upstream 9836 true Chr08: 39516849-39526684 Glycine max
Glyma.08G285500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 39516849-39521848 Glycine max
Glyma.08G285500 5.0kb downstream 5.0kb downstream 9836 true Chr08: 39521849-39531684 Glycine max
Glyma.08G285500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 39526685-39531684 Glycine max
Glyma.08G285500 10.0kb upstream 10.0kb upstream 14836 true Chr08: 39511849-39526684 Glycine max
Glyma.08G285500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 39511849-39521848 Glycine max
Glyma.08G285500 10.0kb downstream 10.0kb downstream 14836 true Chr08: 39521849-39536684 Glycine max
Glyma.08G285500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 39526685-39536684 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301826 5265 Fabidae View MSA
124066910 5270 Rosid View MSA
123738598 5271 Pentapetalae View MSA
122786230 5272 Eudicot View MSA
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.37976 0.0 15.865    
cufflinks 8.89685 0.0 24.8051   High
cufflinks 2.85053 0.0 9.21537    
cufflinks 6.05425 0.0 17.6134    
cufflinks 2.33296 0.0 7.71946    
cufflinks 3.80638 0.0 11.7865    
cufflinks 3.09686 0.0 9.86463    
cufflinks 3.12551 0.0 9.95913    
cufflinks 1.94861 0.0 6.60415   Low
cufflinks 1.326        
cufflinks 0.948        
cufflinks 1.333        
cufflinks 0.333       Low
cufflinks 0.182       Low
cufflinks 0.212       Low
cufflinks 4.683       High
cufflinks 0.343       Low
cufflinks 1.208        
cufflinks 2.259        
cufflinks 5.352       High
cufflinks 0.56        
cufflinks 4.234       High
cufflinks 3.329        
cufflinks 0.626        
cufflinks 4.616       High
cufflinks 1.15        

0 Strain