Gene : Glyma.08G331100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31902:SF1 - ACTIN PATCHES DISTAL PROTEIN 1 Genomic Order:  3311
Name:  ? Glyma.08G331100 Secondary Identifier:  ? PAC:30539915
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G331100 0.5kb upstream 0.5kb upstream 5247 true Chr08: 44882993-44888239 Glycine max
Glyma.08G331100 0.5kb upstream 0.5kb upstream 500 false Chr08: 44882993-44883492 Glycine max
Glyma.08G331100 0.5kb downstream 0.5kb downstream 5247 true Chr08: 44883493-44888739 Glycine max
Glyma.08G331100 0.5kb downstream 0.5kb downstream 500 false Chr08: 44888240-44888739 Glycine max
Glyma.08G331100 1.0kb upstream 1.0kb upstream 5747 true Chr08: 44882493-44888239 Glycine max
Glyma.08G331100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44882493-44883492 Glycine max
Glyma.08G331100 1.0kb downstream 1.0kb downstream 5747 true Chr08: 44883493-44889239 Glycine max
Glyma.08G331100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44888240-44889239 Glycine max
Glyma.08G331100 2.0kb upstream 2.0kb upstream 6747 true Chr08: 44881493-44888239 Glycine max
Glyma.08G331100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44881493-44883492 Glycine max
Glyma.08G331100 2.0kb downstream 2.0kb downstream 6747 true Chr08: 44883493-44890239 Glycine max
Glyma.08G331100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44888240-44890239 Glycine max
Glyma.08G331100 5.0kb upstream 5.0kb upstream 9747 true Chr08: 44878493-44888239 Glycine max
Glyma.08G331100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44878493-44883492 Glycine max
Glyma.08G331100 5.0kb downstream 5.0kb downstream 9747 true Chr08: 44883493-44893239 Glycine max
Glyma.08G331100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44888240-44893239 Glycine max
Glyma.08G331100 10.0kb upstream 10.0kb upstream 14747 true Chr08: 44873493-44888239 Glycine max
Glyma.08G331100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44873493-44883492 Glycine max
Glyma.08G331100 10.0kb downstream 10.0kb downstream 14747 true Chr08: 44883493-44898239 Glycine max
Glyma.08G331100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44888240-44898239 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617682 5273 Angiosperm View MSA
122253865 5265 Fabidae View MSA
123996277 5270 Rosid View MSA
123570781 5271 Pentapetalae View MSA
122605515 5272 Eudicot View MSA
120889825 5274 Embryophyte View MSA
122930540 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.807468 0.0 2.91828   Low
cufflinks 3.19782 0.0 9.97443   High
cufflinks 0.712205 0.0 2.59002   Low
cufflinks 1.79927 0.0 6.05939    
cufflinks 1.65958 0.0 5.64696    
cufflinks 0.836177 0.0 3.01462   Low
cufflinks 2.24256 0.0 7.34411    
cufflinks 3.66152 0.0 11.1883   High
cufflinks 2.32854 0.0 7.59033    
cufflinks 0.262        
cufflinks 0.016     Low Low
cufflinks 0.296        
cufflinks 0.586       High
cufflinks 0.506        
cufflinks 0.156        
cufflinks 0.268        
cufflinks 0.057     Low Low
cufflinks 0.382        
cufflinks 0.764       High
cufflinks 0.257        
cufflinks 0.072       Low
cufflinks 0.354        
cufflinks 0.317        
cufflinks 0.064       Low
cufflinks 0.266        
cufflinks 0.106        

0 Strain