Gene : Glyma.08G335400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15651:SF7 - ARMADILLO REPEAT-CONTAINING PROTEIN 8 Genomic Order:  3354
Name:  ? Glyma.08G335400 Secondary Identifier:  ? PAC:30535488
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G335400 0.5kb upstream 0.5kb upstream 6286 true Chr08: 45236029-45242314 Glycine max
Glyma.08G335400 0.5kb upstream 0.5kb upstream 500 false Chr08: 45236029-45236528 Glycine max
Glyma.08G335400 0.5kb downstream 0.5kb downstream 6286 true Chr08: 45236529-45242814 Glycine max
Glyma.08G335400 0.5kb downstream 0.5kb downstream 500 false Chr08: 45242315-45242814 Glycine max
Glyma.08G335400 1.0kb upstream 1.0kb upstream 6786 true Chr08: 45235529-45242314 Glycine max
Glyma.08G335400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45235529-45236528 Glycine max
Glyma.08G335400 1.0kb downstream 1.0kb downstream 6786 true Chr08: 45236529-45243314 Glycine max
Glyma.08G335400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45242315-45243314 Glycine max
Glyma.08G335400 2.0kb upstream 2.0kb upstream 7786 true Chr08: 45234529-45242314 Glycine max
Glyma.08G335400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45234529-45236528 Glycine max
Glyma.08G335400 2.0kb downstream 2.0kb downstream 7786 true Chr08: 45236529-45244314 Glycine max
Glyma.08G335400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45242315-45244314 Glycine max
Glyma.08G335400 5.0kb upstream 5.0kb upstream 10786 true Chr08: 45231529-45242314 Glycine max
Glyma.08G335400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45231529-45236528 Glycine max
Glyma.08G335400 5.0kb downstream 5.0kb downstream 10786 true Chr08: 45236529-45247314 Glycine max
Glyma.08G335400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45242315-45247314 Glycine max
Glyma.08G335400 10.0kb upstream 10.0kb upstream 15786 true Chr08: 45226529-45242314 Glycine max
Glyma.08G335400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45226529-45236528 Glycine max
Glyma.08G335400 10.0kb downstream 10.0kb downstream 15786 true Chr08: 45236529-45252314 Glycine max
Glyma.08G335400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45242315-45252314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311468 5265 Fabidae View MSA
124062795 5270 Rosid View MSA
123736458 5271 Pentapetalae View MSA
122790429 5272 Eudicot View MSA
122044993 5273 Angiosperm View MSA
121345703 5274 Embryophyte View MSA
123424195 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.58893 0.0 12.8517   High
cufflinks 1.75849 0.0 5.5679   Low
cufflinks 4.31762 0.0 12.1338    
cufflinks 3.41347 0.0 9.87506    
cufflinks 3.59187 0.0 10.3331    
cufflinks 2.85385 0.0 8.43444    
cufflinks 3.7723 0.0 10.8115    
cufflinks 3.74786 0.0 10.7171    
cufflinks 3.30239 0.0 9.575    
cufflinks 1.487        
cufflinks 1.376        
cufflinks 1.748        
cufflinks 1.752        
cufflinks 1.799        
cufflinks 2.16       High
cufflinks 1.161       Low
cufflinks 1.022       Low
cufflinks 1.672        
cufflinks 1.553        
cufflinks 1.248        
cufflinks 1.718        
cufflinks 1.272        
cufflinks 1.203       Low
cufflinks 1.609        
cufflinks 1.224        
cufflinks 1.733        

0 Strain