Gene : Glyma.08G327500 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR11700:SF9 - 37S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Genomic Order:  3275
Name:  ? Glyma.08G327500 Secondary Identifier:  ? PAC:30536810

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G327500 0.5kb upstream 0.5kb upstream 4878 true Chr08: 44563699-44568576 Glycine max
Glyma.08G327500 0.5kb upstream 0.5kb upstream 500 false Chr08: 44568077-44568576 Glycine max
Glyma.08G327500 0.5kb downstream 0.5kb downstream 4878 true Chr08: 44563199-44568076 Glycine max
Glyma.08G327500 0.5kb downstream 0.5kb downstream 500 false Chr08: 44563199-44563698 Glycine max
Glyma.08G327500 1.0kb upstream 1.0kb upstream 5378 true Chr08: 44563699-44569076 Glycine max
Glyma.08G327500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44568077-44569076 Glycine max
Glyma.08G327500 1.0kb downstream 1.0kb downstream 5378 true Chr08: 44562699-44568076 Glycine max
Glyma.08G327500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44562699-44563698 Glycine max
Glyma.08G327500 2.0kb upstream 2.0kb upstream 6378 true Chr08: 44563699-44570076 Glycine max
Glyma.08G327500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44568077-44570076 Glycine max
Glyma.08G327500 2.0kb downstream 2.0kb downstream 6378 true Chr08: 44561699-44568076 Glycine max
Glyma.08G327500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44561699-44563698 Glycine max
Glyma.08G327500 5.0kb upstream 5.0kb upstream 9378 true Chr08: 44563699-44573076 Glycine max
Glyma.08G327500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44568077-44573076 Glycine max
Glyma.08G327500 5.0kb downstream 5.0kb downstream 9378 true Chr08: 44558699-44568076 Glycine max
Glyma.08G327500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44558699-44563698 Glycine max
Glyma.08G327500 10.0kb upstream 10.0kb upstream 14378 true Chr08: 44563699-44578076 Glycine max
Glyma.08G327500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44568077-44578076 Glycine max
Glyma.08G327500 10.0kb downstream 10.0kb downstream 14378 true Chr08: 44553699-44568076 Glycine max
Glyma.08G327500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44553699-44563698 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026497 5273 Angiosperm View MSA
122306608 5265 Fabidae View MSA
124068584 5270 Rosid View MSA
123745585 5271 Pentapetalae View MSA
122786929 5272 Eudicot View MSA
121343916 5274 Embryophyte View MSA
123426498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.6066 0.0 141.409 High High
cufflinks 71.453 0.0 195.661 High High
cufflinks 17.7072 0.0 48.3552    
cufflinks 19.9445 0.0 54.1177 High  
cufflinks 14.2366 0.0 39.6576    
cufflinks 12.6962 0.0 35.7507    
cufflinks 18.6783 0.0 50.8993    
cufflinks 19.3459 0.0 52.5224    
cufflinks 7.47485 0.0 22.439   Low
cufflinks 7.569     High  
cufflinks 0.697       Low
cufflinks 4.388        
cufflinks 1.215        
cufflinks 1.438        
cufflinks 0.961        
cufflinks 34.029     High High
cufflinks 0.848       Low
cufflinks 4.951        
cufflinks 11.363     High  
cufflinks 37.893     High High
cufflinks 1.002        
cufflinks 33.164     High High
cufflinks 31.735     High High
cufflinks 0.885        
cufflinks 34.625     High High
cufflinks 0.746       Low

0 Strain