Gene : Glyma.08G316800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16219:SF1 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 4 Genomic Order:  3168
Name:  ? Glyma.08G316800 Secondary Identifier:  ? PAC:30540184
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G316800 0.5kb upstream 0.5kb upstream 6067 true Chr08: 43654356-43660422 Glycine max
Glyma.08G316800 0.5kb upstream 0.5kb upstream 500 false Chr08: 43659923-43660422 Glycine max
Glyma.08G316800 0.5kb downstream 0.5kb downstream 6067 true Chr08: 43653856-43659922 Glycine max
Glyma.08G316800 0.5kb downstream 0.5kb downstream 500 false Chr08: 43653856-43654355 Glycine max
Glyma.08G316800 1.0kb upstream 1.0kb upstream 6567 true Chr08: 43654356-43660922 Glycine max
Glyma.08G316800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43659923-43660922 Glycine max
Glyma.08G316800 1.0kb downstream 1.0kb downstream 6567 true Chr08: 43653356-43659922 Glycine max
Glyma.08G316800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43653356-43654355 Glycine max
Glyma.08G316800 2.0kb upstream 2.0kb upstream 7567 true Chr08: 43654356-43661922 Glycine max
Glyma.08G316800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43659923-43661922 Glycine max
Glyma.08G316800 2.0kb downstream 2.0kb downstream 7567 true Chr08: 43652356-43659922 Glycine max
Glyma.08G316800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43652356-43654355 Glycine max
Glyma.08G316800 5.0kb upstream 5.0kb upstream 10567 true Chr08: 43654356-43664922 Glycine max
Glyma.08G316800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43659923-43664922 Glycine max
Glyma.08G316800 5.0kb downstream 5.0kb downstream 10567 true Chr08: 43649356-43659922 Glycine max
Glyma.08G316800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43649356-43654355 Glycine max
Glyma.08G316800 10.0kb upstream 10.0kb upstream 15567 true Chr08: 43654356-43669922 Glycine max
Glyma.08G316800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43659923-43669922 Glycine max
Glyma.08G316800 10.0kb downstream 10.0kb downstream 15567 true Chr08: 43644356-43659922 Glycine max
Glyma.08G316800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43644356-43654355 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042369 5273 Angiosperm View MSA
122305472 5265 Fabidae View MSA
124061631 5270 Rosid View MSA
123749615 5271 Pentapetalae View MSA
122789207 5272 Eudicot View MSA
121345524 5274 Embryophyte View MSA
123380233 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.476868 0.0 1.76849   Low
cufflinks 1.79331 0.0 5.98755    
cufflinks 0.710613 0.0 2.57088   Low
cufflinks 1.35576 0.0 4.66806    
cufflinks 2.41993 0.0 7.76631    
cufflinks 6.03826 0.0 17.1257   High
cufflinks 0.851796 0.0 3.05423    
cufflinks 5.35371 0.0 15.3658   High
cufflinks 2.64258 0.0 8.35949    
cufflinks 1.172       High
cufflinks 0.631        
cufflinks 0.393       Low
cufflinks 1.537       High
cufflinks 1.44       High
cufflinks 0.352       Low
cufflinks 0.833        
cufflinks 0.584        
cufflinks 0.42       Low
cufflinks 1.056        
cufflinks 0.597        
cufflinks 0.79        
cufflinks 0.828        
cufflinks 0.989        
cufflinks 0.736        
cufflinks 0.619        
cufflinks 0.664        

0 Strain