Gene : Glyma.08G319700 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  3197
Name:  ? Glyma.08G319700 Secondary Identifier:  ? PAC:30536116
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G319700 0.5kb upstream 0.5kb upstream 1691 true Chr08: 43882780-43884470 Glycine max
Glyma.08G319700 0.5kb upstream 0.5kb upstream 500 false Chr08: 43882780-43883279 Glycine max
Glyma.08G319700 0.5kb downstream 0.5kb downstream 1691 true Chr08: 43883280-43884970 Glycine max
Glyma.08G319700 0.5kb downstream 0.5kb downstream 500 false Chr08: 43884471-43884970 Glycine max
Glyma.08G319700 1.0kb upstream 1.0kb upstream 2191 true Chr08: 43882280-43884470 Glycine max
Glyma.08G319700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43882280-43883279 Glycine max
Glyma.08G319700 1.0kb downstream 1.0kb downstream 2191 true Chr08: 43883280-43885470 Glycine max
Glyma.08G319700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43884471-43885470 Glycine max
Glyma.08G319700 2.0kb upstream 2.0kb upstream 3191 true Chr08: 43881280-43884470 Glycine max
Glyma.08G319700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43881280-43883279 Glycine max
Glyma.08G319700 2.0kb downstream 2.0kb downstream 3191 true Chr08: 43883280-43886470 Glycine max
Glyma.08G319700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43884471-43886470 Glycine max
Glyma.08G319700 5.0kb upstream 5.0kb upstream 6191 true Chr08: 43878280-43884470 Glycine max
Glyma.08G319700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43878280-43883279 Glycine max
Glyma.08G319700 5.0kb downstream 5.0kb downstream 6191 true Chr08: 43883280-43889470 Glycine max
Glyma.08G319700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43884471-43889470 Glycine max
Glyma.08G319700 10.0kb upstream 10.0kb upstream 11191 true Chr08: 43873280-43884470 Glycine max
Glyma.08G319700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43873280-43883279 Glycine max
Glyma.08G319700 10.0kb downstream 10.0kb downstream 11191 true Chr08: 43883280-43894470 Glycine max
Glyma.08G319700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43884471-43894470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313884 5265 Fabidae View MSA
124070125 5270 Rosid View MSA
123742485 5271 Pentapetalae View MSA
122795207 5272 Eudicot View MSA
122049562 5273 Angiosperm View MSA
121311476 5274 Embryophyte View MSA
123348769 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.16609 0.0 7.56199    
cufflinks 2.67207 0.0 9.10632    
cufflinks 6.35862 0.0 19.1733    
cufflinks 6.96144 0.0 20.7993    
cufflinks 1.66888 0.0 5.95549    
cufflinks 0.0843137 0.0 0.344719 Low Low
cufflinks 5.24839 0.0 16.4593    
cufflinks 1.00104 0.0 3.67507    
cufflinks 3.58248 0.0 11.7909    
cufflinks 2.977        
cufflinks 0.192        
cufflinks 4.85        
cufflinks 0.014     Low Low
cufflinks 0.092       Low
cufflinks 1.311        
cufflinks 3.808        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.231        
cufflinks 3.673        
cufflinks 4.624        
cufflinks 0.109       Low
cufflinks 4.941        
cufflinks 8.317     High High
cufflinks 0.823        
cufflinks 5.787        
cufflinks 0.178        

0 Strain