Gene : Glyma.08G319800 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG3036 - Protein involved in cell differentiation/sexual development Genomic Order:  3198
Name:  ? Glyma.08G319800 Secondary Identifier:  ? PAC:30539578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G319800 0.5kb upstream 0.5kb upstream 8708 true Chr08: 43889780-43898487 Glycine max
Glyma.08G319800 0.5kb upstream 0.5kb upstream 500 false Chr08: 43897988-43898487 Glycine max
Glyma.08G319800 0.5kb downstream 0.5kb downstream 8708 true Chr08: 43889280-43897987 Glycine max
Glyma.08G319800 0.5kb downstream 0.5kb downstream 500 false Chr08: 43889280-43889779 Glycine max
Glyma.08G319800 1.0kb upstream 1.0kb upstream 9208 true Chr08: 43889780-43898987 Glycine max
Glyma.08G319800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43897988-43898987 Glycine max
Glyma.08G319800 1.0kb downstream 1.0kb downstream 9208 true Chr08: 43888780-43897987 Glycine max
Glyma.08G319800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43888780-43889779 Glycine max
Glyma.08G319800 2.0kb upstream 2.0kb upstream 10208 true Chr08: 43889780-43899987 Glycine max
Glyma.08G319800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43897988-43899987 Glycine max
Glyma.08G319800 2.0kb downstream 2.0kb downstream 10208 true Chr08: 43887780-43897987 Glycine max
Glyma.08G319800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43887780-43889779 Glycine max
Glyma.08G319800 5.0kb upstream 5.0kb upstream 13208 true Chr08: 43889780-43902987 Glycine max
Glyma.08G319800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43897988-43902987 Glycine max
Glyma.08G319800 5.0kb downstream 5.0kb downstream 13208 true Chr08: 43884780-43897987 Glycine max
Glyma.08G319800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43884780-43889779 Glycine max
Glyma.08G319800 10.0kb upstream 10.0kb upstream 18208 true Chr08: 43889780-43907987 Glycine max
Glyma.08G319800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43897988-43907987 Glycine max
Glyma.08G319800 10.0kb downstream 10.0kb downstream 18208 true Chr08: 43879780-43897987 Glycine max
Glyma.08G319800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43879780-43889779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303523 5265 Fabidae View MSA
124066186 5270 Rosid View MSA
123748122 5271 Pentapetalae View MSA
122792853 5272 Eudicot View MSA
122043480 5273 Angiosperm View MSA
121346204 5274 Embryophyte View MSA
123424774 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1544 0.0 33.3314   Low
cufflinks 15.3367 0.0 41.4633    
cufflinks 16.0396 0.0 43.2422   High
cufflinks 13.6385 0.0 37.0983    
cufflinks 12.1414 0.0 33.2412   Low
cufflinks 16.8121 0.0 45.223   High
cufflinks 13.5448 0.0 36.8544    
cufflinks 13.5644 0.0 36.904    
cufflinks 12.4326 0.0 34.0108    
cufflinks 1.675        
cufflinks 1.152        
cufflinks 1.721        
cufflinks 1.904        
cufflinks 1.608        
cufflinks 1.265        
cufflinks 1.815        
cufflinks 0.968       Low
cufflinks 1.842        
cufflinks 2.053       High
cufflinks 1.745        
cufflinks 0.845       Low
cufflinks 1.825        
cufflinks 1.945        
cufflinks 1.115        
cufflinks 1.794        
cufflinks 0.928       Low

0 Strain