Gene : Glyma.08G311700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10709 - ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1 Genomic Order:  3117
Name:  ? Glyma.08G311700 Secondary Identifier:  ? PAC:30537926
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G311700 0.5kb upstream 0.5kb upstream 21027 true Chr08: 43088653-43109679 Glycine max
Glyma.08G311700 0.5kb upstream 0.5kb upstream 500 false Chr08: 43088653-43089152 Glycine max
Glyma.08G311700 0.5kb downstream 0.5kb downstream 21027 true Chr08: 43089153-43110179 Glycine max
Glyma.08G311700 0.5kb downstream 0.5kb downstream 500 false Chr08: 43109680-43110179 Glycine max
Glyma.08G311700 1.0kb upstream 1.0kb upstream 21527 true Chr08: 43088153-43109679 Glycine max
Glyma.08G311700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43088153-43089152 Glycine max
Glyma.08G311700 1.0kb downstream 1.0kb downstream 21527 true Chr08: 43089153-43110679 Glycine max
Glyma.08G311700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43109680-43110679 Glycine max
Glyma.08G311700 2.0kb upstream 2.0kb upstream 22527 true Chr08: 43087153-43109679 Glycine max
Glyma.08G311700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43087153-43089152 Glycine max
Glyma.08G311700 2.0kb downstream 2.0kb downstream 22527 true Chr08: 43089153-43111679 Glycine max
Glyma.08G311700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43109680-43111679 Glycine max
Glyma.08G311700 5.0kb upstream 5.0kb upstream 25527 true Chr08: 43084153-43109679 Glycine max
Glyma.08G311700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43084153-43089152 Glycine max
Glyma.08G311700 5.0kb downstream 5.0kb downstream 25527 true Chr08: 43089153-43114679 Glycine max
Glyma.08G311700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43109680-43114679 Glycine max
Glyma.08G311700 10.0kb upstream 10.0kb upstream 30527 true Chr08: 43079153-43109679 Glycine max
Glyma.08G311700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43079153-43089152 Glycine max
Glyma.08G311700 10.0kb downstream 10.0kb downstream 30527 true Chr08: 43089153-43119679 Glycine max
Glyma.08G311700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43109680-43119679 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302937 5265 Fabidae View MSA
124063106 5270 Rosid View MSA
123746125 5271 Pentapetalae View MSA
122786380 5272 Eudicot View MSA
122051463 5273 Angiosperm View MSA
121344738 5274 Embryophyte View MSA
123424487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.784509 0.0 2.87482   Low
cufflinks 2.79995 0.0 9.15764    
cufflinks 2.16396 0.0 7.28987    
cufflinks 2.7137 0.0 8.90534    
cufflinks 2.80995 0.0 9.18594    
cufflinks 1.61444 0.0 5.62146    
cufflinks 9.51741 0.0 26.543   High
cufflinks 1.74157 0.0 6.01518    
cufflinks 1.88482 0.0 6.46408    
cufflinks 0.227        
cufflinks 0.094       Low
cufflinks 0.283        
cufflinks 0.219        
cufflinks 0.28        
cufflinks 0.177        
cufflinks 0.21        
cufflinks 0.08       Low
cufflinks 0.67       High
cufflinks 0.302        
cufflinks 0.208        
cufflinks 0.104       Low
cufflinks 0.215        
cufflinks 0.181        
cufflinks 0.08       Low
cufflinks 0.203        
cufflinks 0.122        

0 Strain