Gene : Glyma.08G362400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12276:SF45 - CLATHRIN INTERACTOR 1 Genomic Order:  3624
Name:  ? Glyma.08G362400 Secondary Identifier:  ? PAC:30538255
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G362400 0.5kb upstream 0.5kb upstream 8531 true Chr08: 47378446-47386976 Glycine max
Glyma.08G362400 0.5kb upstream 0.5kb upstream 500 false Chr08: 47386477-47386976 Glycine max
Glyma.08G362400 0.5kb downstream 0.5kb downstream 8531 true Chr08: 47377946-47386476 Glycine max
Glyma.08G362400 0.5kb downstream 0.5kb downstream 500 false Chr08: 47377946-47378445 Glycine max
Glyma.08G362400 1.0kb upstream 1.0kb upstream 9031 true Chr08: 47378446-47387476 Glycine max
Glyma.08G362400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47386477-47387476 Glycine max
Glyma.08G362400 1.0kb downstream 1.0kb downstream 9031 true Chr08: 47377446-47386476 Glycine max
Glyma.08G362400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47377446-47378445 Glycine max
Glyma.08G362400 2.0kb upstream 2.0kb upstream 10031 true Chr08: 47378446-47388476 Glycine max
Glyma.08G362400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47386477-47388476 Glycine max
Glyma.08G362400 2.0kb downstream 2.0kb downstream 10031 true Chr08: 47376446-47386476 Glycine max
Glyma.08G362400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47376446-47378445 Glycine max
Glyma.08G362400 5.0kb upstream 5.0kb upstream 13031 true Chr08: 47378446-47391476 Glycine max
Glyma.08G362400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47386477-47391476 Glycine max
Glyma.08G362400 5.0kb downstream 5.0kb downstream 13031 true Chr08: 47373446-47386476 Glycine max
Glyma.08G362400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47373446-47378445 Glycine max
Glyma.08G362400 10.0kb upstream 10.0kb upstream 18031 true Chr08: 47378446-47396476 Glycine max
Glyma.08G362400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47386477-47396476 Glycine max
Glyma.08G362400 10.0kb downstream 10.0kb downstream 18031 true Chr08: 47368446-47386476 Glycine max
Glyma.08G362400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47368446-47378445 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308035 5265 Fabidae View MSA
124061795 5270 Rosid View MSA
123746942 5271 Pentapetalae View MSA
122786067 5272 Eudicot View MSA
122043253 5273 Angiosperm View MSA
121347121 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9803 0.0 71.3938   Low
cufflinks 23.7742 0.0 99.9868 High  
cufflinks 33.1613 0.0 137.951 High  
cufflinks 39.429 0.0 172.834 High  
cufflinks 34.4475 0.0 143.736 High  
cufflinks 49.0289 0.0 232.628 High High
cufflinks 34.5586 0.0 143.677 High  
cufflinks 39.559 0.0 173.786 High  
cufflinks 21.8696 0.0 90.1043 High Low
cufflinks 7.924     High  
cufflinks 7.299     High  
cufflinks 3.987       Low
cufflinks 7.433     High  
cufflinks 6.213        
cufflinks 3.313       Low
cufflinks 5.726        
cufflinks 7.536     High  
cufflinks 4.91        
cufflinks 4.892        
cufflinks 4.501        
cufflinks 7.184     High  
cufflinks 5.151        
cufflinks 3.728       Low
cufflinks 8.703     High High
cufflinks 4.774        
cufflinks 10.176     High High

0 Strain