Gene : Glyma.08G353600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10383:SF25 - SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEIN Genomic Order:  3536
Name:  ? Glyma.08G353600 Secondary Identifier:  ? PAC:30540729
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G353600 0.5kb upstream 0.5kb upstream 4798 true Chr08: 46669689-46674486 Glycine max
Glyma.08G353600 0.5kb upstream 0.5kb upstream 500 false Chr08: 46673987-46674486 Glycine max
Glyma.08G353600 0.5kb downstream 0.5kb downstream 4798 true Chr08: 46669189-46673986 Glycine max
Glyma.08G353600 0.5kb downstream 0.5kb downstream 500 false Chr08: 46669189-46669688 Glycine max
Glyma.08G353600 1.0kb upstream 1.0kb upstream 5298 true Chr08: 46669689-46674986 Glycine max
Glyma.08G353600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46673987-46674986 Glycine max
Glyma.08G353600 1.0kb downstream 1.0kb downstream 5298 true Chr08: 46668689-46673986 Glycine max
Glyma.08G353600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46668689-46669688 Glycine max
Glyma.08G353600 2.0kb upstream 2.0kb upstream 6298 true Chr08: 46669689-46675986 Glycine max
Glyma.08G353600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46673987-46675986 Glycine max
Glyma.08G353600 2.0kb downstream 2.0kb downstream 6298 true Chr08: 46667689-46673986 Glycine max
Glyma.08G353600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46667689-46669688 Glycine max
Glyma.08G353600 5.0kb upstream 5.0kb upstream 9298 true Chr08: 46669689-46678986 Glycine max
Glyma.08G353600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46673987-46678986 Glycine max
Glyma.08G353600 5.0kb downstream 5.0kb downstream 9298 true Chr08: 46664689-46673986 Glycine max
Glyma.08G353600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46664689-46669688 Glycine max
Glyma.08G353600 10.0kb upstream 10.0kb upstream 14298 true Chr08: 46669689-46683986 Glycine max
Glyma.08G353600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46673987-46683986 Glycine max
Glyma.08G353600 10.0kb downstream 10.0kb downstream 14298 true Chr08: 46659689-46673986 Glycine max
Glyma.08G353600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46659689-46669688 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307980 5265 Fabidae View MSA
124068693 5270 Rosid View MSA
123739439 5271 Pentapetalae View MSA
122791258 5272 Eudicot View MSA
122047921 5273 Angiosperm View MSA
121351702 5274 Embryophyte View MSA
123428628 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 110.597 0.0 365.238 High  
cufflinks 55.1868 0.0 186.653 High Low
cufflinks 213.292 0.0 951.434 High High
cufflinks 99.6635 0.0 317.241 High  
cufflinks 84.2283 0.0 252.702 High  
cufflinks 140.285 0.0 508.051 High  
cufflinks 92.9365 0.0 290.034 High  
cufflinks 90.0565 0.0 275.027 High  
cufflinks 77.5304 0.0 289.192 High  
cufflinks 23.594     High  
cufflinks 36.52     High  
cufflinks 41.893     High High
cufflinks 19.205     High  
cufflinks 11.762     High Low
cufflinks 28.836     High  
cufflinks 20.277     High  
cufflinks 34.477     High  
cufflinks 26.745     High  
cufflinks 23.02     High  
cufflinks 23.431     High  
cufflinks 34.815     High  
cufflinks 23.899     High  
cufflinks 17.272     High Low
cufflinks 43.774     High High
cufflinks 20.654     High  
cufflinks 38.793     High High

0 Strain