Gene : Glyma.08G356600 G. max Wm82.a2.v1
Defline:  (1 of 26) PTHR10042 - EARLY GROWTH RESPONSE PROTEIN-RELATED Genomic Order:  3566
Name:  ? Glyma.08G356600 Secondary Identifier:  ? PAC:30538983
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G356600 0.5kb upstream 0.5kb upstream 2656 true Chr08: 46904562-46907217 Glycine max
Glyma.08G356600 0.5kb upstream 0.5kb upstream 500 false Chr08: 46904562-46905061 Glycine max
Glyma.08G356600 0.5kb downstream 0.5kb downstream 2656 true Chr08: 46905062-46907717 Glycine max
Glyma.08G356600 0.5kb downstream 0.5kb downstream 500 false Chr08: 46907218-46907717 Glycine max
Glyma.08G356600 1.0kb upstream 1.0kb upstream 3156 true Chr08: 46904062-46907217 Glycine max
Glyma.08G356600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46904062-46905061 Glycine max
Glyma.08G356600 1.0kb downstream 1.0kb downstream 3156 true Chr08: 46905062-46908217 Glycine max
Glyma.08G356600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46907218-46908217 Glycine max
Glyma.08G356600 2.0kb upstream 2.0kb upstream 4156 true Chr08: 46903062-46907217 Glycine max
Glyma.08G356600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46903062-46905061 Glycine max
Glyma.08G356600 2.0kb downstream 2.0kb downstream 4156 true Chr08: 46905062-46909217 Glycine max
Glyma.08G356600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46907218-46909217 Glycine max
Glyma.08G356600 5.0kb upstream 5.0kb upstream 7156 true Chr08: 46900062-46907217 Glycine max
Glyma.08G356600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46900062-46905061 Glycine max
Glyma.08G356600 5.0kb downstream 5.0kb downstream 7156 true Chr08: 46905062-46912217 Glycine max
Glyma.08G356600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46907218-46912217 Glycine max
Glyma.08G356600 10.0kb upstream 10.0kb upstream 12156 true Chr08: 46895062-46907217 Glycine max
Glyma.08G356600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46895062-46905061 Glycine max
Glyma.08G356600 10.0kb downstream 10.0kb downstream 12156 true Chr08: 46905062-46917217 Glycine max
Glyma.08G356600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46907218-46917217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313719 5265 Fabidae View MSA
124063867 5270 Rosid View MSA
123749739 5271 Pentapetalae View MSA
122794818 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56675 0.0 5.31892    
cufflinks 1.32089 0.0 4.55546    
cufflinks 1.20905 0.0 4.19767   Low
cufflinks 1.92657 0.0 6.34096    
cufflinks 1.39784 0.0 4.80677    
cufflinks 2.25141 0.0 7.28859   High
cufflinks 2.24658 0.0 7.29506   High
cufflinks 2.04882 0.0 6.69967    
cufflinks 1.35897 0.0 4.67772    
cufflinks 0.033     Low  
cufflinks 0.016     Low  
cufflinks 0.053     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.152       High
cufflinks 0.074     Low  
cufflinks 0.124       High
cufflinks 0.011     Low Low
cufflinks 0.028     Low  
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.016     Low  

0 Strain