Gene : Glyma.08G345800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  3458
Name:  ? Glyma.08G345800 Secondary Identifier:  ? PAC:30535775
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G345800 0.5kb upstream 0.5kb upstream 4152 true Chr08: 46060930-46065081 Glycine max
Glyma.08G345800 0.5kb upstream 0.5kb upstream 500 false Chr08: 46064582-46065081 Glycine max
Glyma.08G345800 0.5kb downstream 0.5kb downstream 4152 true Chr08: 46060430-46064581 Glycine max
Glyma.08G345800 0.5kb downstream 0.5kb downstream 500 false Chr08: 46060430-46060929 Glycine max
Glyma.08G345800 1.0kb upstream 1.0kb upstream 4652 true Chr08: 46060930-46065581 Glycine max
Glyma.08G345800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46064582-46065581 Glycine max
Glyma.08G345800 1.0kb downstream 1.0kb downstream 4652 true Chr08: 46059930-46064581 Glycine max
Glyma.08G345800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46059930-46060929 Glycine max
Glyma.08G345800 2.0kb upstream 2.0kb upstream 5652 true Chr08: 46060930-46066581 Glycine max
Glyma.08G345800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46064582-46066581 Glycine max
Glyma.08G345800 2.0kb downstream 2.0kb downstream 5652 true Chr08: 46058930-46064581 Glycine max
Glyma.08G345800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46058930-46060929 Glycine max
Glyma.08G345800 5.0kb upstream 5.0kb upstream 8652 true Chr08: 46060930-46069581 Glycine max
Glyma.08G345800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46064582-46069581 Glycine max
Glyma.08G345800 5.0kb downstream 5.0kb downstream 8652 true Chr08: 46055930-46064581 Glycine max
Glyma.08G345800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46055930-46060929 Glycine max
Glyma.08G345800 10.0kb upstream 10.0kb upstream 13652 true Chr08: 46060930-46074581 Glycine max
Glyma.08G345800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46064582-46074581 Glycine max
Glyma.08G345800 10.0kb downstream 10.0kb downstream 13652 true Chr08: 46050930-46064581 Glycine max
Glyma.08G345800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46050930-46060929 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122312379 5265 Fabidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.36536 0.0 7.29358   Low
cufflinks 5.08933 0.0 14.2308    
cufflinks 2.47693 0.0 7.54732   Low
cufflinks 6.43206 0.0 17.6138    
cufflinks 9.67994 0.0 25.9747    
cufflinks 6.86941 0.0 18.7506    
cufflinks 10.6698 0.0 28.555    
cufflinks 10.2436 0.0 27.4137    
cufflinks 9.89227 0.0 26.5109    
cufflinks 14.914     High High
cufflinks 4.98        
cufflinks 3.69        
cufflinks 3.644        
cufflinks 2.79        
cufflinks 53.259     High High
cufflinks 2.643        
cufflinks 13.602     High High
cufflinks 5.781        
cufflinks 2.705        
cufflinks 2.052        
cufflinks 11.67     High  
cufflinks 2.233        
cufflinks 2.741        
cufflinks 1.901       Low
cufflinks 2.26        
cufflinks 9.571     High  

0 Strain