Gene : Glyma.09G024500 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase Genomic Order:  245
Name:  ? Glyma.09G024500 Secondary Identifier:  ? PAC:30483120
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5837 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G024500 0.5kb upstream 0.5kb upstream 7120 true Chr09: 1964440-1971559 Glycine max
Glyma.09G024500 0.5kb upstream 0.5kb upstream 500 false Chr09: 1964440-1964939 Glycine max
Glyma.09G024500 0.5kb downstream 0.5kb downstream 7120 true Chr09: 1964940-1972059 Glycine max
Glyma.09G024500 0.5kb downstream 0.5kb downstream 500 false Chr09: 1971560-1972059 Glycine max
Glyma.09G024500 1.0kb upstream 1.0kb upstream 7620 true Chr09: 1963940-1971559 Glycine max
Glyma.09G024500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1963940-1964939 Glycine max
Glyma.09G024500 1.0kb downstream 1.0kb downstream 7620 true Chr09: 1964940-1972559 Glycine max
Glyma.09G024500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1971560-1972559 Glycine max
Glyma.09G024500 2.0kb upstream 2.0kb upstream 8620 true Chr09: 1962940-1971559 Glycine max
Glyma.09G024500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1962940-1964939 Glycine max
Glyma.09G024500 2.0kb downstream 2.0kb downstream 8620 true Chr09: 1964940-1973559 Glycine max
Glyma.09G024500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1971560-1973559 Glycine max
Glyma.09G024500 5.0kb upstream 5.0kb upstream 11620 true Chr09: 1959940-1971559 Glycine max
Glyma.09G024500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1959940-1964939 Glycine max
Glyma.09G024500 5.0kb downstream 5.0kb downstream 11620 true Chr09: 1964940-1976559 Glycine max
Glyma.09G024500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1971560-1976559 Glycine max
Glyma.09G024500 10.0kb upstream 10.0kb upstream 16620 true Chr09: 1954940-1971559 Glycine max
Glyma.09G024500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1954940-1964939 Glycine max
Glyma.09G024500 10.0kb downstream 10.0kb downstream 16620 true Chr09: 1964940-1981559 Glycine max
Glyma.09G024500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1971560-1981559 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301753 5265 Fabidae View MSA
124061989 5270 Rosid View MSA
123752148 5271 Pentapetalae View MSA
122787718 5272 Eudicot View MSA
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.773 0.0 37.4341   High
cufflinks 10.2128 0.0 45.2844    
cufflinks 9.72949 0.0 37.6461    
cufflinks 4.9908 0.0 20.4059    
cufflinks 0.949529 0.0 5.31611   Low
cufflinks 2.02465 0.0 10.9631    
cufflinks 4.51771 0.0 15.9101    
cufflinks 4.86086 0.0 20.4141    
cufflinks 0.60017 0.0 5.28831   Low
cufflinks 1.165        
cufflinks 0.158        
cufflinks 1.061        
cufflinks 0.009     Low Low
cufflinks 0.026     Low Low
cufflinks 0.041     Low Low
cufflinks 2.681       High
cufflinks 0.037     Low Low
cufflinks 0.746        
cufflinks 1.508        
cufflinks 3.301       High
cufflinks 0.188        
cufflinks 2.979       High
cufflinks 2.313        
cufflinks 0.152        
cufflinks 3.168       High
cufflinks 0.106        

0 Strain