Gene : Glyma.09G014600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12663:SF0 - PDS5 Genomic Order:  146
Name:  ? Glyma.09G014600 Secondary Identifier:  ? PAC:30486827
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G014600 0.5kb upstream 0.5kb upstream 18221 true Chr09: 1106773-1124993 Glycine max
Glyma.09G014600 0.5kb upstream 0.5kb upstream 500 false Chr09: 1106773-1107272 Glycine max
Glyma.09G014600 0.5kb downstream 0.5kb downstream 18221 true Chr09: 1107273-1125493 Glycine max
Glyma.09G014600 0.5kb downstream 0.5kb downstream 500 false Chr09: 1124994-1125493 Glycine max
Glyma.09G014600 1.0kb upstream 1.0kb upstream 18721 true Chr09: 1106273-1124993 Glycine max
Glyma.09G014600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1106273-1107272 Glycine max
Glyma.09G014600 1.0kb downstream 1.0kb downstream 18721 true Chr09: 1107273-1125993 Glycine max
Glyma.09G014600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1124994-1125993 Glycine max
Glyma.09G014600 2.0kb upstream 2.0kb upstream 19721 true Chr09: 1105273-1124993 Glycine max
Glyma.09G014600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1105273-1107272 Glycine max
Glyma.09G014600 2.0kb downstream 2.0kb downstream 19721 true Chr09: 1107273-1126993 Glycine max
Glyma.09G014600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1124994-1126993 Glycine max
Glyma.09G014600 5.0kb upstream 5.0kb upstream 22721 true Chr09: 1102273-1124993 Glycine max
Glyma.09G014600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1102273-1107272 Glycine max
Glyma.09G014600 5.0kb downstream 5.0kb downstream 22721 true Chr09: 1107273-1129993 Glycine max
Glyma.09G014600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1124994-1129993 Glycine max
Glyma.09G014600 10.0kb upstream 10.0kb upstream 27721 true Chr09: 1097273-1124993 Glycine max
Glyma.09G014600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1097273-1107272 Glycine max
Glyma.09G014600 10.0kb downstream 10.0kb downstream 27721 true Chr09: 1107273-1134993 Glycine max
Glyma.09G014600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1124994-1134993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313957 5265 Fabidae View MSA
124050365 5270 Rosid View MSA
123751291 5271 Pentapetalae View MSA
122791249 5272 Eudicot View MSA
122045093 5273 Angiosperm View MSA
121348998 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5589 0.0 29.0103   High
cufflinks 8.9799 0.0 24.4194    
cufflinks 13.3482 0.0 37.7496   High
cufflinks 6.33418 0.0 16.9584    
cufflinks 6.25075 0.0 16.7121    
cufflinks 6.80902 0.0 18.2553    
cufflinks 5.25617 0.0 14.0229   Low
cufflinks 6.72207 0.0 18.0272    
cufflinks 8.32618 0.0 22.5265    
cufflinks 3.144       Low
cufflinks 3.313       Low
cufflinks 4.03        
cufflinks 4.243        
cufflinks 3.842        
cufflinks 3.331       Low
cufflinks 5.934       High
cufflinks 3.649        
cufflinks 4.508        
cufflinks 4.834        
cufflinks 5.26        
cufflinks 3.767        
cufflinks 5.973       High
cufflinks 6.149       High
cufflinks 3.869        
cufflinks 5.297        
cufflinks 4.501        

0 Strain