Gene : Glyma.09G014800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Genomic Order:  148
Name:  ? Glyma.09G014800 Secondary Identifier:  ? PAC:30483017
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G014800 0.5kb upstream 0.5kb upstream 2677 true Chr09: 1130699-1133375 Glycine max
Glyma.09G014800 0.5kb upstream 0.5kb upstream 500 false Chr09: 1130699-1131198 Glycine max
Glyma.09G014800 0.5kb downstream 0.5kb downstream 2677 true Chr09: 1131199-1133875 Glycine max
Glyma.09G014800 0.5kb downstream 0.5kb downstream 500 false Chr09: 1133376-1133875 Glycine max
Glyma.09G014800 1.0kb upstream 1.0kb upstream 3177 true Chr09: 1130199-1133375 Glycine max
Glyma.09G014800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1130199-1131198 Glycine max
Glyma.09G014800 1.0kb downstream 1.0kb downstream 3177 true Chr09: 1131199-1134375 Glycine max
Glyma.09G014800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1133376-1134375 Glycine max
Glyma.09G014800 2.0kb upstream 2.0kb upstream 4177 true Chr09: 1129199-1133375 Glycine max
Glyma.09G014800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1129199-1131198 Glycine max
Glyma.09G014800 2.0kb downstream 2.0kb downstream 4177 true Chr09: 1131199-1135375 Glycine max
Glyma.09G014800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1133376-1135375 Glycine max
Glyma.09G014800 5.0kb upstream 5.0kb upstream 7177 true Chr09: 1126199-1133375 Glycine max
Glyma.09G014800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1126199-1131198 Glycine max
Glyma.09G014800 5.0kb downstream 5.0kb downstream 7177 true Chr09: 1131199-1138375 Glycine max
Glyma.09G014800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1133376-1138375 Glycine max
Glyma.09G014800 10.0kb upstream 10.0kb upstream 12177 true Chr09: 1121199-1133375 Glycine max
Glyma.09G014800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1121199-1131198 Glycine max
Glyma.09G014800 10.0kb downstream 10.0kb downstream 12177 true Chr09: 1131199-1143375 Glycine max
Glyma.09G014800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1133376-1143375 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306751 5265 Fabidae View MSA
124050829 5270 Rosid View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.45743 0.0 11.7269    
cufflinks 3.44506 0.0 11.6828    
cufflinks 3.56614 0.0 12.0232    
cufflinks 4.41305 0.0 14.4797    
cufflinks 3.55526 0.0 11.9919    
cufflinks 3.84826 0.0 12.8631    
cufflinks 4.4264 0.0 14.565    
cufflinks 5.05134 0.0 16.28   High
cufflinks 5.48498 0.0 17.4721   High
cufflinks 1.78       Low
cufflinks 2.142        
cufflinks 2.42        
cufflinks 1.757       Low
cufflinks 2.203        
cufflinks 2.479       High
cufflinks 2.296        
cufflinks 1.611       Low
cufflinks 2.514       High
cufflinks 1.723       Low
cufflinks 2.107        
cufflinks 2.69       High
cufflinks 1.99        
cufflinks 2.202        
cufflinks 1.808        
cufflinks 2.449       High
cufflinks 1.824        

0 Strain