Gene : Glyma.09G015900 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  159
Name:  ? Glyma.09G015900 Secondary Identifier:  ? PAC:30482934
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G015900 0.5kb upstream 0.5kb upstream 8094 true Chr09: 1220201-1228294 Glycine max
Glyma.09G015900 0.5kb upstream 0.5kb upstream 500 false Chr09: 1220201-1220700 Glycine max
Glyma.09G015900 0.5kb downstream 0.5kb downstream 8094 true Chr09: 1220701-1228794 Glycine max
Glyma.09G015900 0.5kb downstream 0.5kb downstream 500 false Chr09: 1228295-1228794 Glycine max
Glyma.09G015900 1.0kb upstream 1.0kb upstream 8594 true Chr09: 1219701-1228294 Glycine max
Glyma.09G015900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1219701-1220700 Glycine max
Glyma.09G015900 1.0kb downstream 1.0kb downstream 8594 true Chr09: 1220701-1229294 Glycine max
Glyma.09G015900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1228295-1229294 Glycine max
Glyma.09G015900 2.0kb upstream 2.0kb upstream 9594 true Chr09: 1218701-1228294 Glycine max
Glyma.09G015900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1218701-1220700 Glycine max
Glyma.09G015900 2.0kb downstream 2.0kb downstream 9594 true Chr09: 1220701-1230294 Glycine max
Glyma.09G015900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1228295-1230294 Glycine max
Glyma.09G015900 5.0kb upstream 5.0kb upstream 12594 true Chr09: 1215701-1228294 Glycine max
Glyma.09G015900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1215701-1220700 Glycine max
Glyma.09G015900 5.0kb downstream 5.0kb downstream 12594 true Chr09: 1220701-1233294 Glycine max
Glyma.09G015900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1228295-1233294 Glycine max
Glyma.09G015900 10.0kb upstream 10.0kb upstream 17594 true Chr09: 1210701-1228294 Glycine max
Glyma.09G015900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1210701-1220700 Glycine max
Glyma.09G015900 10.0kb downstream 10.0kb downstream 17594 true Chr09: 1220701-1238294 Glycine max
Glyma.09G015900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1228295-1238294 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026454 5273 Angiosperm View MSA
122313072 5265 Fabidae View MSA
124067148 5270 Rosid View MSA
123737998 5271 Pentapetalae View MSA
122789015 5272 Eudicot View MSA
121296339 5274 Embryophyte View MSA
123334520 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.367135 0.0 2.72474   Low
cufflinks 2.50763 0.0 11.3218    
cufflinks 0.567313 0.0 3.19221    
cufflinks 1.99587 0.0 10.8912    
cufflinks 1.57646 0.0 6.96578    
cufflinks 0.495355 0.0 2.85743    
cufflinks 9.8075 0.0 40.94   High
cufflinks 25.395 0.0 101.803 High High
cufflinks 1.99887 0.0 9.66538    
cufflinks 1.123       High
cufflinks 0.044     Low  
cufflinks 0.265        
cufflinks 0.175        
cufflinks 0.02     Low  
cufflinks 0.002     Low Low
cufflinks 0.057     Low  
cufflinks 0.325       High
cufflinks 0.09     Low  
cufflinks 0.26        
cufflinks 0.028     Low  
cufflinks 0.055     Low  
cufflinks 0.048     Low  
cufflinks 0.049     Low  
cufflinks 0.033     Low  
cufflinks 0.062     Low  
cufflinks 0.08        

0 Strain