Gene : Glyma.09G017400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31314:SF5 - MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN-RELATED Genomic Order:  174
Name:  ? Glyma.09G017400 Secondary Identifier:  ? PAC:30485871
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G017400 0.5kb upstream 0.5kb upstream 5148 true Chr09: 1366140-1371287 Glycine max
Glyma.09G017400 0.5kb upstream 0.5kb upstream 500 false Chr09: 1366140-1366639 Glycine max
Glyma.09G017400 0.5kb downstream 0.5kb downstream 5148 true Chr09: 1366640-1371787 Glycine max
Glyma.09G017400 0.5kb downstream 0.5kb downstream 500 false Chr09: 1371288-1371787 Glycine max
Glyma.09G017400 1.0kb upstream 1.0kb upstream 5648 true Chr09: 1365640-1371287 Glycine max
Glyma.09G017400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1365640-1366639 Glycine max
Glyma.09G017400 1.0kb downstream 1.0kb downstream 5648 true Chr09: 1366640-1372287 Glycine max
Glyma.09G017400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1371288-1372287 Glycine max
Glyma.09G017400 2.0kb upstream 2.0kb upstream 6648 true Chr09: 1364640-1371287 Glycine max
Glyma.09G017400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1364640-1366639 Glycine max
Glyma.09G017400 2.0kb downstream 2.0kb downstream 6648 true Chr09: 1366640-1373287 Glycine max
Glyma.09G017400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1371288-1373287 Glycine max
Glyma.09G017400 5.0kb upstream 5.0kb upstream 9648 true Chr09: 1361640-1371287 Glycine max
Glyma.09G017400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1361640-1366639 Glycine max
Glyma.09G017400 5.0kb downstream 5.0kb downstream 9648 true Chr09: 1366640-1376287 Glycine max
Glyma.09G017400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1371288-1376287 Glycine max
Glyma.09G017400 10.0kb upstream 10.0kb upstream 14648 true Chr09: 1356640-1371287 Glycine max
Glyma.09G017400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1356640-1366639 Glycine max
Glyma.09G017400 10.0kb downstream 10.0kb downstream 14648 true Chr09: 1366640-1381287 Glycine max
Glyma.09G017400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1371288-1381287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303013 5265 Fabidae View MSA
124060454 5270 Rosid View MSA
123742883 5271 Pentapetalae View MSA
122794375 5272 Eudicot View MSA
122045611 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.1897 0.0 105.494    
cufflinks 21.2273 0.0 100.846 High  
cufflinks 21.1745 0.0 100.959 High  
cufflinks 16.9206 0.0 75.9737    
cufflinks 17.6217 0.0 84.3824    
cufflinks 31.9617 0.0 145.604 High High
cufflinks 13.3323 0.0 65.4579   Low
cufflinks 20.7825 0.0 98.4424    
cufflinks 23.9677 0.0 106.606 High  
cufflinks 1.054        
cufflinks 0.586       Low
cufflinks 1.081        
cufflinks 0.918        
cufflinks 0.833        
cufflinks 0.322       Low
cufflinks 0.844        
cufflinks 1.352       High
cufflinks 1.1        
cufflinks 1.1        
cufflinks 0.726        
cufflinks 0.541       Low
cufflinks 0.831        
cufflinks 0.912        
cufflinks 0.916        
cufflinks 0.688        
cufflinks 0.844        

0 Strain