Gene : Glyma.09G005200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11266:SF15 - PEROXISOMAL MEMBRANE PROTEIN PMP22 Genomic Order:  52
Name:  ? Glyma.09G005200 Secondary Identifier:  ? PAC:30482670
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G005200 0.5kb upstream 0.5kb upstream 3353 true Chr09: 413616-416968 Glycine max
Glyma.09G005200 0.5kb upstream 0.5kb upstream 500 false Chr09: 413616-414115 Glycine max
Glyma.09G005200 0.5kb downstream 0.5kb downstream 3353 true Chr09: 414116-417468 Glycine max
Glyma.09G005200 0.5kb downstream 0.5kb downstream 500 false Chr09: 416969-417468 Glycine max
Glyma.09G005200 1.0kb upstream 1.0kb upstream 3853 true Chr09: 413116-416968 Glycine max
Glyma.09G005200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 413116-414115 Glycine max
Glyma.09G005200 1.0kb downstream 1.0kb downstream 3853 true Chr09: 414116-417968 Glycine max
Glyma.09G005200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 416969-417968 Glycine max
Glyma.09G005200 2.0kb upstream 2.0kb upstream 4853 true Chr09: 412116-416968 Glycine max
Glyma.09G005200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 412116-414115 Glycine max
Glyma.09G005200 2.0kb downstream 2.0kb downstream 4853 true Chr09: 414116-418968 Glycine max
Glyma.09G005200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 416969-418968 Glycine max
Glyma.09G005200 5.0kb upstream 5.0kb upstream 7853 true Chr09: 409116-416968 Glycine max
Glyma.09G005200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 409116-414115 Glycine max
Glyma.09G005200 5.0kb downstream 5.0kb downstream 7853 true Chr09: 414116-421968 Glycine max
Glyma.09G005200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 416969-421968 Glycine max
Glyma.09G005200 10.0kb upstream 10.0kb upstream 12853 true Chr09: 404116-416968 Glycine max
Glyma.09G005200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 404116-414115 Glycine max
Glyma.09G005200 10.0kb downstream 10.0kb downstream 12853 true Chr09: 414116-426968 Glycine max
Glyma.09G005200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 416969-426968 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302900 5265 Fabidae View MSA
124069781 5270 Rosid View MSA
123740059 5271 Pentapetalae View MSA
122795026 5272 Eudicot View MSA
122043631 5273 Angiosperm View MSA
121345972 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.0666 0.0 139.577 High High
cufflinks 34.0978 0.0 91.0191 High  
cufflinks 32.1178 0.0 85.7621 High  
cufflinks 24.958 0.0 67.1251 High  
cufflinks 14.1538 0.0 39.7104    
cufflinks 8.06544 0.0 24.1753   Low
cufflinks 21.0446 0.0 57.2634    
cufflinks 31.5584 0.0 84.3047 High  
cufflinks 28.8182 0.0 77.1577 High  
cufflinks 9.055     High  
cufflinks 3.201       Low
cufflinks 9.903     High  
cufflinks 3.256       Low
cufflinks 2.259       Low
cufflinks 4.578        
cufflinks 6.034        
cufflinks 14.066     High High
cufflinks 14.283     High High
cufflinks 9.255     High  
cufflinks 8.871     High  
cufflinks 5.09        
cufflinks 9.012     High  
cufflinks 13.816     High High
cufflinks 6.305     High  
cufflinks 6.388        
cufflinks 3.906        

0 Strain