Gene : Glyma.09G005400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12701:SF18 - 4D656-RELATED Genomic Order:  54
Name:  ? Glyma.09G005400 Secondary Identifier:  ? PAC:30482673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G005400 0.5kb upstream 0.5kb upstream 3205 true Chr09: 422469-425673 Glycine max
Glyma.09G005400 0.5kb upstream 0.5kb upstream 500 false Chr09: 422469-422968 Glycine max
Glyma.09G005400 0.5kb downstream 0.5kb downstream 3205 true Chr09: 422969-426173 Glycine max
Glyma.09G005400 0.5kb downstream 0.5kb downstream 500 false Chr09: 425674-426173 Glycine max
Glyma.09G005400 1.0kb upstream 1.0kb upstream 3705 true Chr09: 421969-425673 Glycine max
Glyma.09G005400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 421969-422968 Glycine max
Glyma.09G005400 1.0kb downstream 1.0kb downstream 3705 true Chr09: 422969-426673 Glycine max
Glyma.09G005400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 425674-426673 Glycine max
Glyma.09G005400 2.0kb upstream 2.0kb upstream 4705 true Chr09: 420969-425673 Glycine max
Glyma.09G005400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 420969-422968 Glycine max
Glyma.09G005400 2.0kb downstream 2.0kb downstream 4705 true Chr09: 422969-427673 Glycine max
Glyma.09G005400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 425674-427673 Glycine max
Glyma.09G005400 5.0kb upstream 5.0kb upstream 7705 true Chr09: 417969-425673 Glycine max
Glyma.09G005400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 417969-422968 Glycine max
Glyma.09G005400 5.0kb downstream 5.0kb downstream 7705 true Chr09: 422969-430673 Glycine max
Glyma.09G005400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 425674-430673 Glycine max
Glyma.09G005400 10.0kb upstream 10.0kb upstream 12705 true Chr09: 412969-425673 Glycine max
Glyma.09G005400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 412969-422968 Glycine max
Glyma.09G005400 10.0kb downstream 10.0kb downstream 12705 true Chr09: 422969-435673 Glycine max
Glyma.09G005400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 425674-435673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301253 5265 Fabidae View MSA
124069525 5270 Rosid View MSA
123738929 5271 Pentapetalae View MSA
122789620 5272 Eudicot View MSA
122043200 5273 Angiosperm View MSA
121347866 5274 Embryophyte View MSA
123426905 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.24992 0.0 4.44421   Low
cufflinks 4.27947 0.0 13.1938    
cufflinks 1.84912 0.0 6.35094   Low
cufflinks 3.64502 0.0 11.4749    
cufflinks 7.49712 0.0 21.428    
cufflinks 15.7061 0.0 42.2873   High
cufflinks 4.5238 0.0 13.8426    
cufflinks 7.02755 0.0 20.2085    
cufflinks 5.78283 0.0 17.0774    
cufflinks 3.203        
cufflinks 1.015        
cufflinks 1.471        
cufflinks 6.448       High
cufflinks 8.72     High High
cufflinks 1.052        
cufflinks 1.295        
cufflinks 1.585        
cufflinks 2.064        
cufflinks 2.783        
cufflinks 0.901       Low
cufflinks 0.955        
cufflinks 1.265        
cufflinks 1.549        
cufflinks 1.76        
cufflinks 1.18        
cufflinks 1.533        

0 Strain