Gene : Glyma.09G008500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31803:SF10 - UBIQUINOL OXIDASE 4, CHLOROPLASTIC/CHROMOPLASTIC Genomic Order:  85
Name:  ? Glyma.09G008500 Secondary Identifier:  ? PAC:30482925
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4302 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G008500 0.5kb upstream 0.5kb upstream 5283 true Chr09: 672160-677442 Glycine max
Glyma.09G008500 0.5kb upstream 0.5kb upstream 500 false Chr09: 676943-677442 Glycine max
Glyma.09G008500 0.5kb downstream 0.5kb downstream 5283 true Chr09: 671660-676942 Glycine max
Glyma.09G008500 0.5kb downstream 0.5kb downstream 500 false Chr09: 671660-672159 Glycine max
Glyma.09G008500 1.0kb upstream 1.0kb upstream 5783 true Chr09: 672160-677942 Glycine max
Glyma.09G008500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 676943-677942 Glycine max
Glyma.09G008500 1.0kb downstream 1.0kb downstream 5783 true Chr09: 671160-676942 Glycine max
Glyma.09G008500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 671160-672159 Glycine max
Glyma.09G008500 2.0kb upstream 2.0kb upstream 6783 true Chr09: 672160-678942 Glycine max
Glyma.09G008500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 676943-678942 Glycine max
Glyma.09G008500 2.0kb downstream 2.0kb downstream 6783 true Chr09: 670160-676942 Glycine max
Glyma.09G008500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 670160-672159 Glycine max
Glyma.09G008500 5.0kb upstream 5.0kb upstream 9783 true Chr09: 672160-681942 Glycine max
Glyma.09G008500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 676943-681942 Glycine max
Glyma.09G008500 5.0kb downstream 5.0kb downstream 9783 true Chr09: 667160-676942 Glycine max
Glyma.09G008500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 667160-672159 Glycine max
Glyma.09G008500 10.0kb upstream 10.0kb upstream 14783 true Chr09: 672160-686942 Glycine max
Glyma.09G008500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 676943-686942 Glycine max
Glyma.09G008500 10.0kb downstream 10.0kb downstream 14783 true Chr09: 662160-676942 Glycine max
Glyma.09G008500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 662160-672159 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299462 5265 Fabidae View MSA
124073832 5270 Rosid View MSA
123736785 5271 Pentapetalae View MSA
122786368 5272 Eudicot View MSA
122045919 5273 Angiosperm View MSA
121344765 5274 Embryophyte View MSA
123427941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.7708 0.0 60.7619 High High
cufflinks 4.6992 0.0 14.2378   Low
cufflinks 18.8755 0.0 50.4694    
cufflinks 8.17838 0.0 23.1116    
cufflinks 7.18571 0.0 20.682    
cufflinks 13.6583 0.0 37.054    
cufflinks 5.02637 0.0 15.1921   Low
cufflinks 9.20184 0.0 25.716    
cufflinks 24.8336 0.0 66.2574 High High
cufflinks 1.48        
cufflinks 13.03     High High
cufflinks 4.567        
cufflinks 1.682        
cufflinks 1.127       Low
cufflinks 16.619     High High
cufflinks 1.523        
cufflinks 4.157        
cufflinks 3.092        
cufflinks 1.41        
cufflinks 1.6        
cufflinks 20.942     High High
cufflinks 1.877        
cufflinks 1.447        
cufflinks 12.208     High High
cufflinks 1.541        
cufflinks 9.037     High  

0 Strain