Gene : Glyma.09G048600 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2695 - WD40 repeat protein Genomic Order:  486
Name:  ? Glyma.09G048600 Secondary Identifier:  ? PAC:30484355
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G048600 0.5kb upstream 0.5kb upstream 7406 true Chr09: 4197857-4205262 Glycine max
Glyma.09G048600 0.5kb upstream 0.5kb upstream 500 false Chr09: 4204763-4205262 Glycine max
Glyma.09G048600 0.5kb downstream 0.5kb downstream 7406 true Chr09: 4197357-4204762 Glycine max
Glyma.09G048600 0.5kb downstream 0.5kb downstream 500 false Chr09: 4197357-4197856 Glycine max
Glyma.09G048600 1.0kb upstream 1.0kb upstream 7906 true Chr09: 4197857-4205762 Glycine max
Glyma.09G048600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4204763-4205762 Glycine max
Glyma.09G048600 1.0kb downstream 1.0kb downstream 7906 true Chr09: 4196857-4204762 Glycine max
Glyma.09G048600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4196857-4197856 Glycine max
Glyma.09G048600 2.0kb upstream 2.0kb upstream 8906 true Chr09: 4197857-4206762 Glycine max
Glyma.09G048600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4204763-4206762 Glycine max
Glyma.09G048600 2.0kb downstream 2.0kb downstream 8906 true Chr09: 4195857-4204762 Glycine max
Glyma.09G048600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4195857-4197856 Glycine max
Glyma.09G048600 5.0kb upstream 5.0kb upstream 11906 true Chr09: 4197857-4209762 Glycine max
Glyma.09G048600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4204763-4209762 Glycine max
Glyma.09G048600 5.0kb downstream 5.0kb downstream 11906 true Chr09: 4192857-4204762 Glycine max
Glyma.09G048600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4192857-4197856 Glycine max
Glyma.09G048600 10.0kb upstream 10.0kb upstream 16906 true Chr09: 4197857-4214762 Glycine max
Glyma.09G048600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4204763-4214762 Glycine max
Glyma.09G048600 10.0kb downstream 10.0kb downstream 16906 true Chr09: 4187857-4204762 Glycine max
Glyma.09G048600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4187857-4197856 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304478 5265 Fabidae View MSA
124061482 5270 Rosid View MSA
123740611 5271 Pentapetalae View MSA
122787574 5272 Eudicot View MSA
122044538 5273 Angiosperm View MSA
121346276 5274 Embryophyte View MSA
123380359 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.70471 0.0 6.08503   High
cufflinks 0.837836 0.0 4.65044    
cufflinks 1.01509 0.0 4.09277    
cufflinks 0.923483 0.0 3.88836    
cufflinks 1.04446 0.0 4.17103    
cufflinks 0.951774 0.0 5.14149    
cufflinks 1.76138 0.0 6.311   High
cufflinks 0.783869 0.0 3.40404   Low
cufflinks 1.18919 0.0 4.69939    
cufflinks 0.081     Low Low
cufflinks 0.336        
cufflinks 0.226        
cufflinks 0.201        
cufflinks 0.235        
cufflinks 0.36       High
cufflinks 0.17        
cufflinks 0.189        
cufflinks 0.315        
cufflinks 0.193        
cufflinks 0.159        
cufflinks 0.473       High
cufflinks 0.219        
cufflinks 0.211        
cufflinks 0.327        
cufflinks 0.165        
cufflinks 0.268        

0 Strain